RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	ZNF233	A6NK53	670 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	GOLGA8J	A6NMD2	632 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	CHURC1-FNTB	B4DL54	471 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	EIF3D	O15371	548 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	STX6	O43752	255 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	FOXD2	O60548	495 aa	Predicted RBP	11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	PPP6R2	O75170	966 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	TADA3	O75528	432 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	FNTB	P49356	437 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	GPR15	P49685	360 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	CDR1	P51861	262 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	ATXN1	P54253	815 aa	Known RBP	11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	AMPD2	Q01433	879 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	BFSP1	Q12934	665 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	MYO1E	Q12965	1108 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	SIM2	Q14190	667 aa	Predicted RBP	11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	PDGFRL	Q15198	375 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	DUOXA2	Q1HG44	320 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	TXNDC8	Q6A555	127 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	WDR5B	Q86VZ2	330 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	OSTM1	Q86WC4	334 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	ADGRF2	Q8IZF7	708 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	TTC8	Q8TAM2	541 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	HPDL	Q96IR7	371 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	RTKN	Q9BST9	563 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	PANK2	Q9BZ23	570 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	TRIM9	Q9C026	710 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	GTF3C4	Q9UKN8	822 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	CDV3	Q9UKY7	258 aa	Known RBP	11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	SNX9	Q9Y5X1	595 aa		11.94	□□□□□ -0.5
CBWD1-222	ENST00000613508	EPG5	Q9HCE0	2579 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	ATG13	O75143	517 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	PRPF6	O94906	941 aa	Known RBP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	FAM163B	P0C2L3	166 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	TMEM191B	P0C7N4	346 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	TCF3	P15923	654 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	PFKL	P17858	780 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	ACAT1	P24752	427 aa	Known RBP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	SNRPF	P62306	86 aa	Known RBP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	AMPD3	Q01432	767 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	FAM160A1	Q05DH4	1040 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	MAPRE1	Q15691	268 aa	Known RBP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	CSRP2	Q16527	193 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	DDR2	Q16832	855 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	FSTL4	Q6MZW2	842 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	VSTM1	Q6UX27	236 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	WDR49	Q8IV35	697 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	PDILT	Q8N807	584 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	KIAA1958	Q8N8K9	716 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	OR5B17	Q8NGF7	314 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	RIN3	Q8TB24	985 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	ZNF507	Q8TCN5	953 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	KBTBD7	Q8WVZ9	684 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	ANKRD36BP1	Q96IX9	119 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	FAM84A	Q96KN4	292 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	SPATA17	Q96L03	361 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	EBF3	Q9H4W6	596 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	PCIF1	Q9H4Z3	704 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	GCNT4	Q9P109	453 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	CDH9	Q9ULB4	789 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	USP18	Q9UMW8	372 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	OBSL1	O75147	1896 aa		11.93	□□□□□ -0.5
CBWD1-222	ENST00000613508	TRAV19	A0A0A6YYK7	116 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508		K7ELQ4	463 aa	Predicted RBP	11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	SPTLC2	O15270	562 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	AKAP3	O75969	853 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	YEATS4	O95619	227 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	TNNC2	P02585	160 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	KRT19	P08727	400 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	USP17L7	P0C7H9	530 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	ARSA	P15289	507 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	DRD1	P21728	446 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	WARS	P23381	471 aa	Known RBP	11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	EHHADH	Q08426	723 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	SPEM2	Q0P670	501 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	USP4	Q13107	963 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	STK38	Q15208	465 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	ZNF77	Q15935	545 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	CCDC142	Q17RM4	750 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	FBXO43	Q4G163	708 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	SDHAF4	Q5VUM1	108 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	TRIM68	Q6AZZ1	485 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	C4orf50	Q6ZRC1	276 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	PRR23B	Q6ZRT6	265 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	CBWD2	Q8IUF1	395 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	CPA6	Q8N4T0	437 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	FSIP1	Q8NA03	581 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	IQUB	Q8NA54	791 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	GLIS3	Q8NEA6	775 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	NETO1	Q8TDF5	533 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	OSCP1	Q8WVF1	389 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	EXOC4	Q96A65	974 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	LOXL4	Q96JB6	756 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	SLC22A12	Q96S37	553 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	C7orf25	Q9BPX7	421 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	MAGEF1	Q9HAY2	307 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms