RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ATF6P18850 670 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 RAD23AP54725 363 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FAM47AQ5JRC9 791 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KLHDC10Q6PID8 442 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KSR2Q6VAB6 950 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 JAMLQ86YT9 394 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ADAM30Q9UKF2 790 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CBY1Q9Y3M2 126 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ACTL7BQ9Y614 415 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 EDC4Q6P2E9 1401 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 DISP3Q9P2K9 1392 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 G3V3G9 751 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 AP5Z1O43299 807 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 BMP10O95393 424 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 RHAGQ02094 409 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ACAP1Q15027 740 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 DCAF8Q5TAQ9 597 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KLHL17Q6TDP4 642 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 STOX1Q6ZVD7 989 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC60Q8IWA6 550 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CKAP2Q8WWK9 683 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CACYBPQ9HB71 228 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 POLD4Q9HCU8 107 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CASZ1Q86V15 1759 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 GOLGA8SH3BPF8 625 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SEC24AO95486 1093 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 NADKO95544 446 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TTLL1O95922 423 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ITGB3P05106 788 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 GLI1P08151 1106 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FGFR4P22455 802 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 PRIM2P49643 509 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SLC5A3P53794 718 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SATL1Q86VE3 508 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SPAG16Q8N0X2 631 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 MIGA1Q8NAN2 632 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SHCBP1LQ9BZQ2 653 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CHMP1AQ9HD42 196 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF224Q9NZL3 707 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 USTQ9Y2C2 406 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FADS2P1A8MWK0 482 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ETV1P50549 477 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 NAPAP54920 295 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TRAP1Q12931 704 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TRAF3Q13114 568 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TBX2Q13207 712 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 C4orf50Q6ZRC1 276 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ANKS1AQ92625 1134 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SOX13Q9UN79 622 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 JCADQ9P266 1359 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KCNQ3O43525 872 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CSTF3Q12996 717 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SWI5Q1ZZU3 235 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZBED5Q49AG3 693 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 BRSK2Q8IWQ3 736 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 UBASH3BQ8TF42 649 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF285Q96NJ3 590 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SPOCK3Q9BQ16 436 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TSEN34Q9BSV6 310 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 DMGDHQ9UI17 866 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 APPL1Q9UKG1 709 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 AFF2P51816 1311 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 MAP3K15Q6ZN16 1313 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 H7C0S8 307 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 VBP1P61758 197 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ECT2LQ008S8 904 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 EFR3AQ14156 821 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 BROXQ5VW32 411 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KIAA1841Q6NSI8 718 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SLC30A5Q8TAD4 765 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZBTB18Q99592 522 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SYT15Q9BQS2 421 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KLHL3Q9UH77 587 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF510Q9Y2H8 683 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SUGT1Q9Y2Z0 365 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CDK5RAP2Q96SN8 1893 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 COL17A1Q9UMD9 1497 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 PI4KAP2A4QPH2 592 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 GPC5P78333 572 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CALCRLQ16602 461 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 PDZD4Q76G19 769 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 PI4KAP1Q8N8J0 262 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 VPS33AQ96AX1 596 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KIFC1Q9BW19 673 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 C6orf62Q9GZU0 229 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ETNK2Q9NVF9 386 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 RUVBL2Q9Y230 463 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FAM32AQ9Y421 112 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 DDX60Q8IY21 1712 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ATP9BO43861 1147 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SYNCRIPO60506 623 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CCNE2O96020 404 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TPBGLP0DKB5 382 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 MMP13P45452 471 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 KRT17Q04695 432 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 FAM83BQ5T0W9 1011 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 C12orf56Q8IXR9 622 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SRBD1Q8N5C6 995 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 STARD8Q92502 1023 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 SEC31BQ9NQW1 1179 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms