RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 LRRC52Q8N7C0 313 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 CHFRQ96EP1 664 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 CBWD1Q9BRT8 395 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 FGFBP2Q9BYJ0 223 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 OLFML3Q9NRN5 406 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 UXTQ9UBK9 157 aaPredicted RBP26.19■■□□□ 1.78
CDKN3-211ENST00000611205 ITGA11Q9UKX5 1188 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 HELZP42694 1942 aaKnown RBP26.18■■□□□ 1.78
CDKN3-211ENST00000611205 SOBPA7XYQ1 873 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 TRDMT1O14717 391 aaKnown RBP26.18■■□□□ 1.78
CDKN3-211ENST00000611205 AXIN1O15169 862 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 ATG13O75143 517 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 EGFP01133 1207 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 TMEM191BP0C7N4 346 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 AMPD2Q01433 879 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 CCDC142Q17RM4 750 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 ADGRF2Q8IZF7 708 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 MTMR12Q9C0I1 747 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 PDE11AQ9HCR9 933 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 ABCB6Q9NP58 842 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 PANK4Q9NVE7 773 aa26.18■■□□□ 1.78
CDKN3-211ENST00000611205 HCRTO43612 131 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 RNF40O75150 1001 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 TADA3O75528 432 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 NOL4O94818 638 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 PRPF6O94906 941 aaKnown RBP26.17■■□□□ 1.78
CDKN3-211ENST00000611205 CENPBP07199 599 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-211ENST00000611205 CCDC192P0DO97 292 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 RBP5P82980 135 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 RESTQ13127 1097 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 CUL4AQ13619 759 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 ALCAMQ13740 583 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 PPM1JQ5JR12 505 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 LMBRD2Q68DH5 695 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-211ENST00000611205 SPATA2LQ8IUW3 424 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-211ENST00000611205 SCN4BQ8IWT1 228 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 GAB3Q8WWW8 586 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 PKMYT1Q99640 499 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 GDAP2Q9NXN4 497 aa26.17■■□□□ 1.78
CDKN3-211ENST00000611205 R3HCC1Q9Y3T6 440 aaKnown RBP26.17■■□□□ 1.78
CDKN3-211ENST00000611205 KIAA1549LQ6ZVL6 1849 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 RPP40O75818 363 aaKnown RBP26.16■■□□□ 1.78
CDKN3-211ENST00000611205 KCNA4P22459 653 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 ZNF268Q14587 947 aaPredicted RBP26.16■■□□□ 1.78
CDKN3-211ENST00000611205 MTF1Q14872 753 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 PDGFRLQ15198 375 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 TOP6BLQ8N6T0 577 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 CXorf38Q8TB03 319 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 TRMT2BQ96GJ1 504 aaKnown RBP26.16■■□□□ 1.78
CDKN3-211ENST00000611205 P2RY13Q9BPV8 354 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 ARRDC1-AS1Q9H2J1 176 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 TMEM206Q9H813 350 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 FBRSL1Q9HCM7 1045 aaKnown RBP26.16■■□□□ 1.78
CDKN3-211ENST00000611205 SIX4Q9UIU6 781 aa26.16■■□□□ 1.78
CDKN3-211ENST00000611205 FOXD2O60548 495 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-211ENST00000611205 CKMP06732 381 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 ADRB1P08588 477 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 GJA4P35212 333 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 LHX1P48742 406 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 GALK1P51570 392 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 FAM160A1Q05DH4 1040 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 CCDC6Q16204 474 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 AASDHQ4L235 1098 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-211ENST00000611205 CACNA2D4Q7Z3S7 1137 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 GPD1LQ8N335 351 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 CPA6Q8N4T0 437 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 ANKRD36BP1Q96IX9 119 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 CYP2S1Q96SQ9 504 aa26.15■■□□□ 1.78
CDKN3-211ENST00000611205 POLR3BQ9NW08 1133 aaPredicted RBP26.15■■□□□ 1.78
CDKN3-211ENST00000611205 DUS2Q9NX74 493 aaKnown RBP26.15■■□□□ 1.78
CDKN3-211ENST00000611205 PTPRDP23468 1912 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 A0A087X0B3 334 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 TRAV19A0A0A6YYK7 116 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 FRMD3A2A2Y4 597 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 USP17L7P0C7H9 530 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 SYT1P21579 422 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 DRD1P21728 446 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 PCSK1P29120 753 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 IFNAR2P48551 515 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 SOWAHAQ2M3V2 549 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 NAIF1Q69YI7 327 aaPredicted RBP26.14■■□□□ 1.78
CDKN3-211ENST00000611205 KBTBD6Q86V97 674 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 PDILTQ8N807 584 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 SPATA18Q8TC71 538 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 EXOC4Q96A65 974 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 MYRFLQ96LU7 910 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 SLC22A12Q96S37 553 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 ECT2Q9H8V3 914 aa26.14■■□□□ 1.78
CDKN3-211ENST00000611205 CCDC163A0A0D9SF12 145 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 GABRDO14764 452 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 MYO1EQ12965 1108 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 SF3A2Q15428 464 aaKnown RBP26.13■■□□□ 1.77
CDKN3-211ENST00000611205 ZNF77Q15935 545 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 CFAP221Q4G0U5 840 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 CCDC65Q8IXS2 484 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 C12orf50Q8NA57 414 aaPredicted RBP26.13■■□□□ 1.77
CDKN3-211ENST00000611205 OSCP1Q8WVF1 389 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 FUBP3Q96I24 572 aaKnown RBP eCLIP26.13■■□□□ 1.77
CDKN3-211ENST00000611205 HHIPQ96QV1 700 aa26.13■■□□□ 1.77
CDKN3-211ENST00000611205 USP28Q96RU2 1077 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms