RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TRMT10CQ7L0Y3 403 aaKnown RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 POLNQ7Z5Q5 900 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 EPS8L3Q8TE67 593 aaKnown RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 FNIP1Q8TF40 1166 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 TLCD1Q96CP7 247 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 NT5C1AQ9BXI3 368 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 EIF2AQ9BY44 585 aaKnown RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 EPN3Q9H201 632 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 GNEQ9Y223 722 aaKnown RBP14.35□□□□□ -0.11
NEK3-205ENST00000610828 DNAH12Q6ZR08 3092 aa14.35□□□□□ -0.11
NEK3-205ENST00000610828 PIK3R2O00459 728 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 CYP2C9P11712 490 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 MAP2K5Q13163 448 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 HADHQ16836 314 aaKnown RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 IZUMO3Q5VZ72 239 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 APBB1IPQ7Z5R6 666 aaPredicted RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 ARFGAP1Q8N6T3 406 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 KAT2BQ92831 832 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 PGM2Q96G03 612 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 PWWP2AQ96N64 755 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 TRIM6Q9C030 488 aaPredicted RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 TSPYL1Q9H0U9 437 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 FLRT1Q9NZU1 646 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 TSPAN16Q9UKR8 245 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 SNX9Q9Y5X1 595 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 STAU1O95793 577 aaKnown RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 KRT7P08729 469 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 KLRC2P26717 231 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 IL1R2P27930 398 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 GABRB2P47870 512 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 YARSP54577 528 aaKnown RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 GSCP56915 257 aaPredicted RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 HUNKP57058 714 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 CDC42EP1Q00587 391 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 PTGISQ16647 500 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 P3H1Q32P28 736 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 GLRA4Q5JXX5 417 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 MORN1Q5T089 497 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 C6orf118Q5T5N4 469 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 FAM102AQ5T9C2 384 aaPredicted RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 OLFML2BQ68BL8 750 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 IPO4Q8TEX9 1081 aaKnown RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
NEK3-205ENST00000610828 RNF19AQ9NV58 838 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
NEK3-205ENST00000610828 RASGRF2O14827 1237 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 PPEF2O14830 753 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 PTPN7P35236 360 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 SEC24CP53992 1094 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 DYNLT1P63172 113 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 PLCB3Q01970 1234 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 MFSD10Q14728 455 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 CROCCP2Q86T23 111 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 TTC39CQ8N584 583 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 GLIS1Q8NBF1 620 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 BBOF1Q8ND07 529 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 DNAJB3Q8WWF6 145 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 SNX27Q96L92 541 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 APOL6Q9BWW8 343 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 TUBGCP4Q9UGJ1 667 aa14.33□□□□□ -0.11
NEK3-205ENST00000610828 SMIM35A0A1B0GVV1 85 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 E7EVH7 732 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 CYP3A5P20815 502 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 PSMC4P43686 418 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 KYNUQ16719 465 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 CST9Q5W186 159 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 DRICH1Q6PGQ1 229 aaPredicted RBP14.33□□□□□ -0.12
NEK3-205ENST00000610828 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 MCRS1Q96EZ8 462 aa14.33□□□□□ -0.12
NEK3-205ENST00000610828 NXF3Q9H4D5 531 aaKnown RBP14.33□□□□□ -0.12
NEK3-205ENST00000610828 SCN1AP35498 2009 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 C3orf70A6NLC5 250 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 IGF2BP3O00425 579 aaKnown RBP eCLIP14.32□□□□□ -0.12
NEK3-205ENST00000610828 EBAG9O00559 213 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 RNF8O76064 485 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 ZSCAN5DPP0CG00 497 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 ZNF865P0CJ78 1059 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 DARSP14868 501 aaKnown RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 ETS1P14921 441 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 ARSEP51690 589 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 IFI35P80217 286 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 HIC1Q14526 733 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 CCL14Q16627 93 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 LONRF1Q17RB8 773 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 LCLAT1Q6UWP7 414 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 ALLCQ8N6M5 410 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 C18orf25Q96B23 403 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 MRPL45Q9BRJ2 306 aaKnown RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 TMEM109Q9BVC6 243 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 SAE1Q9UBE0 346 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 KIAA1257Q9ULG3 409 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 DERAQ9Y315 318 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 MBLAC1A4D2B0 266 aaPredicted RBP14.32□□□□□ -0.12
NEK3-205ENST00000610828 E5RJQ4 531 aa14.32□□□□□ -0.12
NEK3-205ENST00000610828 RECQL4O94761 1208 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms