RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 IGF2RP11717 2491 aa20.7■□□□□ 0.9
SGMS1-208ENST00000608287 NUP210Q8TEM1 1887 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 FAM237AA0A1B0GTK4 181 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 CPB1P15086 417 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 CSRP1P21291 193 aaKnown RBP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 HOXD13P35453 343 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 EPHB3P54753 998 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 GRSF1Q12849 480 aaKnown RBP eCLIP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 MRPL58Q14197 206 aaKnown RBP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 TXNDC11Q6PKC3 985 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 NELFCDQ8IXH7 590 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 SHKBP1Q8TBC3 707 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 ZCCHC14Q8WYQ9 949 aaKnown RBP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 GOLPH3LQ9H4A5 285 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 EXOC1Q9NV70 894 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 THG1LQ9NWX6 298 aaKnown RBP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 RBAKQ9NYW8 714 aaPredicted RBP20.69■□□□□ 0.9
SGMS1-208ENST00000608287 LHX6Q9UPM6 363 aa20.69■□□□□ 0.9
SGMS1-208ENST00000608287 SRRM3A6NNA2 597 aaPredicted RBP20.68■□□□□ 0.9
SGMS1-208ENST00000608287 PPEF2O14830 753 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 EXTL3O43909 919 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 ARHGAP15Q53QZ3 475 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 DSTYKQ6XUX3 929 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 ARID3BQ8IVW6 561 aaPredicted RBP20.68■□□□□ 0.9
SGMS1-208ENST00000608287 BRSK2Q8IWQ3 736 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 GPD1LQ8N335 351 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 SCFD1Q8WVM8 642 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 TMEM209Q96SK2 561 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 ZMYM5Q9UJ78 669 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 PCDHB8Q9UN66 801 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 UBE4BO95155 1302 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 FRYQ5TBA9 3013 aa20.68■□□□□ 0.9
SGMS1-208ENST00000608287 GOLGA6L4A6NEF3 574 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 NRG2O14511 850 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-208ENST00000608287 KIAA0391O15091 583 aaKnown RBP20.67■□□□□ 0.9
SGMS1-208ENST00000608287 KLRC4O43908 158 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 CAVIN2O95810 425 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 GJA1P17302 382 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 ITPRIPL2Q3MIP1 535 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 PLK5Q496M5 336 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 SH3PXD2AQ5TCZ1 1133 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 C9orf57Q5W0N0 161 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 EFCAB13Q8IY85 973 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 TMEM121BQ9BXQ6 578 aaPredicted RBP20.67■□□□□ 0.9
SGMS1-208ENST00000608287 DPP3Q9NY33 737 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 GTSE1Q9NYZ3 720 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 YIPF1Q9Y548 306 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 ASB3Q9Y575 518 aa20.67■□□□□ 0.9
SGMS1-208ENST00000608287 A0A1W2PRU2 124 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 C4orf47A7E2U8 309 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 M0QZQ0 153 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 MYL1P05976 194 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 ALDH1A3P47895 512 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 WNT7BP56706 349 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 TFAMQ00059 246 aaKnown RBP20.66■□□□□ 0.9
SGMS1-208ENST00000608287 CREB5Q02930 508 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 KMT5BQ4FZB7 885 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 KRBA2Q6ZNG9 492 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 NT5DC4Q86YG4 428 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 BPIFB1Q8TDL5 484 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 GATA6Q92908 595 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 TMEM9BQ9NQ34 198 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 C2orf42Q9NWW7 574 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 HSPBP1Q9NZL4 362 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 WASF3Q9UPY6 502 aa20.66■□□□□ 0.9
SGMS1-208ENST00000608287 TIMM13Q9Y5L4 95 aaPredicted RBP20.66■□□□□ 0.9
SGMS1-208ENST00000608287 NCANO14594 1321 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 ANO9A1A5B4 782 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 PIRO00625 290 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 CLIC2O15247 247 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 TGFB1I1O43294 461 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 ZNF202O95125 648 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 PRR29P0C7W0 189 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 WEE1P30291 646 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 AARSP49588 968 aaKnown RBP eCLIP20.65■□□□□ 0.9
SGMS1-208ENST00000608287 LILRA4P59901 499 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 PSMD2Q13200 908 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 BMT2Q1RMZ1 405 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 HS2ST1Q7LGA3 356 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 ITIH5Q86UX2 942 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 SCNM1Q9BWG6 230 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 AGPAT3Q9NRZ7 376 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 NEUROG3Q9Y4Z2 214 aa20.65■□□□□ 0.9
SGMS1-208ENST00000608287 BCLAF3A2AJT9 711 aaKnown RBP20.64■□□□□ 0.89
SGMS1-208ENST00000608287 ZNF233A6NK53 670 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 KHNYNO15037 678 aaKnown RBP20.64■□□□□ 0.89
SGMS1-208ENST00000608287 RPN1P04843 607 aaKnown RBP20.64■□□□□ 0.89
SGMS1-208ENST00000608287 PAX3P23760 479 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 RDXP35241 583 aaKnown RBP20.64■□□□□ 0.89
SGMS1-208ENST00000608287 CYP2J2P51589 502 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 YWHAHQ04917 246 aaPredicted RBP20.64■□□□□ 0.89
SGMS1-208ENST00000608287 RING1Q06587 406 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 STK4Q13043 487 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 KNOP1Q1ED39 458 aaKnown RBP20.64■□□□□ 0.89
SGMS1-208ENST00000608287 FBXO43Q4G163 708 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 WDR44Q5JSH3 913 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 USP37Q86T82 979 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 CBWD2Q8IUF1 395 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 CCDC26Q8TAB7 109 aa20.64■□□□□ 0.89
SGMS1-208ENST00000608287 CACTINQ8WUQ7 758 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms