RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 HMGA1P17096 107 aaKnown RBP15.96■□□□□ 0.15
CTSA-216ENST00000607212 PDCP20941 246 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 RBP5P82980 135 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 MTF1Q14872 753 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 TMEM196Q5HYL7 178 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 MON1AQ86VX9 555 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 TMEM86AQ8N2M4 240 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 C1orf127Q8N9H9 656 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 FSIP1Q8NA03 581 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 ZSWIM2Q8NEG5 633 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 GAB3Q8WWW8 586 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 FAM84AQ96KN4 292 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 HHIPQ96QV1 700 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 P2RY13Q9BPV8 354 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 FAM83CQ9BQN1 747 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 ACBD6Q9BR61 282 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 GTF3C4Q9UKN8 822 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 ITGA11Q9UKX5 1188 aa15.96■□□□□ 0.15
CTSA-216ENST00000607212 SPTBN2O15020 2390 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 TRDMT1O14717 391 aaKnown RBP15.95■□□□□ 0.14
CTSA-216ENST00000607212 PRPF6O94906 941 aaKnown RBP15.95■□□□□ 0.14
CTSA-216ENST00000607212 TNNC2P02585 160 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 ADRB1P08588 477 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 USP17L7P0C7H9 530 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 GARTP22102 1010 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 PCSK1P29120 753 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 MYO1EQ12965 1108 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 ALCAMQ13740 583 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 KCNB1Q14721 858 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 SF3A2Q15428 464 aaKnown RBP15.95■□□□□ 0.14
CTSA-216ENST00000607212 LMBRD2Q68DH5 695 aaPredicted RBP15.95■□□□□ 0.14
CTSA-216ENST00000607212 TMEM150AQ86TG1 271 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 CBWD1Q9BRT8 395 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 MTMR12Q9C0I1 747 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 PANK4Q9NVE7 773 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 FRYLO94915 3013 aa15.95■□□□□ 0.14
CTSA-216ENST00000607212 NCOR2Q9Y618 2525 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 PPP1R37O75864 691 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 DRD1P21728 446 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 ANXA13P27216 316 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 HOXA6P31267 233 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 LHX1P48742 406 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 GALK1P51570 392 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 WNT7BP56706 349 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 FAM160A1Q05DH4 1040 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 NR1H3Q13133 447 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 C4orf50Q6ZRC1 276 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 STXBP4Q6ZWJ1 553 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 KBTBD6Q86V97 674 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 OSTM1Q86WC4 334 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 CCDC65Q8IXS2 484 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 GPD1LQ8N335 351 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 LRRC52Q8N7C0 313 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 RPLP0P6Q8NHW5 317 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 LEO1Q8WVC0 666 aaPredicted RBP15.94■□□□□ 0.14
CTSA-216ENST00000607212 DDX1Q92499 740 aaKnown RBP15.94■□□□□ 0.14
CTSA-216ENST00000607212 CD101Q93033 1021 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 ATP2A3Q93084 1043 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 CHFRQ96EP1 664 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 CYP2S1Q96SQ9 504 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 TMEM206Q9H813 350 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 PDE11AQ9HCR9 933 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 ABCB6Q9NP58 842 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 MAGEC2Q9UBF1 373 aaPredicted RBP15.94■□□□□ 0.14
CTSA-216ENST00000607212 FBXO2Q9UK22 296 aaPredicted RBP15.94■□□□□ 0.14
CTSA-216ENST00000607212 SRPRBQ9Y5M8 271 aaKnown RBP15.94■□□□□ 0.14
CTSA-216ENST00000607212 WNT6Q9Y6F9 365 aa15.94■□□□□ 0.14
CTSA-216ENST00000607212 OTOL1A6NHN0 477 aaPredicted RBP15.93■□□□□ 0.14
CTSA-216ENST00000607212 HCRTO43612 131 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 NOL4O94818 638 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 GJA4P35212 333 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 GRIK1P39086 918 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 CASP5P51878 434 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 PSMC1P62191 440 aaKnown RBP15.93■□□□□ 0.14
CTSA-216ENST00000607212 CYP27A1Q02318 531 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 ZNF268Q14587 947 aaPredicted RBP15.93■□□□□ 0.14
CTSA-216ENST00000607212 FBXO43Q4G163 708 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 TTC30AQ86WT1 665 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 PDILTQ8N807 584 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 ARL14EPQ8N8R7 260 aaPredicted RBP15.93■□□□□ 0.14
CTSA-216ENST00000607212 OSCP1Q8WVF1 389 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 ACDQ96AP0 544 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 DNAJC19Q96DA6 116 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 MMS19Q96T76 1030 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 SYT15Q9BQS2 421 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 ECT2Q9H8V3 914 aa15.93■□□□□ 0.14
CTSA-216ENST00000607212 POLR3BQ9NW08 1133 aaPredicted RBP15.93■□□□□ 0.14
CTSA-216ENST00000607212 SOBPA7XYQ1 873 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 EPN2O95208 641 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 ABL1P00519 1130 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 GBP1P32455 592 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 ELF2Q15723 593 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 CCDC142Q17RM4 750 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 NAIF1Q69YI7 327 aaPredicted RBP15.92■□□□□ 0.14
CTSA-216ENST00000607212 CAMKK1Q8N5S9 505 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 RIN3Q8TB24 985 aa15.92■□□□□ 0.14
CTSA-216ENST00000607212 SH3RF2Q8TEC5 729 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms