RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TTPALQ9BTX7 342 aa17.49■□□□□ 0.39
PMF1-206ENST00000606952 ZCWPW1Q9H0M4 648 aa17.49■□□□□ 0.39
PMF1-206ENST00000606952 PDCL3Q9H2J4 239 aa17.49■□□□□ 0.39
PMF1-206ENST00000606952 SPG21Q9NZD8 308 aa17.49■□□□□ 0.39
PMF1-206ENST00000606952 H7C4K7 107 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 ATP2C2O75185 946 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 MTA2O94776 668 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 SOD2P04179 222 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 ACAT1P24752 427 aaKnown RBP17.48■□□□□ 0.39
PMF1-206ENST00000606952 GABRB2P47870 512 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 RGS19P49795 217 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 BCAT1P54687 386 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 PSMC1P62191 440 aaKnown RBP17.48■□□□□ 0.39
PMF1-206ENST00000606952 BST2Q10589 180 aaKnown RBP17.48■□□□□ 0.39
PMF1-206ENST00000606952 GOLGA7BQ2TAP0 167 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 USP41Q3LFD5 358 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 RTP2Q5QGT7 225 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 ANKS3Q6ZW76 656 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 RNF10Q8N5U6 811 aaKnown RBP17.48■□□□□ 0.39
PMF1-206ENST00000606952 C1orf131Q8NDD1 294 aaKnown RBP17.48■□□□□ 0.39
PMF1-206ENST00000606952 SLC35F5Q8WV83 523 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 TMEM169Q96HH4 297 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 FAM49BQ9NUQ9 324 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 TRMT1Q9NXH9 659 aaKnown RBP17.48■□□□□ 0.39
PMF1-206ENST00000606952 MYO1AQ9UBC5 1043 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 MTRRQ9UBK8 725 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 HESX1Q9UBX0 185 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 CYTH4Q9UIA0 394 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 RWDD3Q9Y3V2 267 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 BACE2Q9Y5Z0 518 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 PLXNA4Q9HCM2 1894 aa17.48■□□□□ 0.39
PMF1-206ENST00000606952 MYBPHLA2RUH7 354 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 M0QYV0 167 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 TUBB4AP04350 444 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 CYP1A2P05177 515 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 CALB1P05937 261 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 CCDC130P13994 396 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 PLA2G4AP47712 749 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 TSPY1Q01534 308 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 DSG1Q02413 1049 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 SMARCB1Q12824 385 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 MDH1BQ5I0G3 518 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 C9orf50Q5SZB4 431 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 SPOUT1Q5T280 376 aaKnown RBP17.47■□□□□ 0.39
PMF1-206ENST00000606952 FAM35AQ86V20 835 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 PASD1Q8IV76 773 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 SLC2A14Q8TDB8 520 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 CTNNBL1Q8WYA6 563 aaPredicted RBP17.47■□□□□ 0.39
PMF1-206ENST00000606952 RFFLQ8WZ73 363 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 PCED1BQ96HM7 432 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 SLC4A5Q9BY07 1137 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 DUSP16Q9BY84 665 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 B3GNT5Q9BYG0 378 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 UBXN6Q9BZV1 441 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 THAP2Q9H0W7 228 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 CSNK1G1Q9HCP0 422 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 PCDHB12Q9Y5F1 795 aa17.47■□□□□ 0.39
PMF1-206ENST00000606952 MYH10P35580 1976 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 TCRBV5S1A1TA0A578 114 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 TLL1O43897 1013 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 NPR3P17342 541 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 GPC5P78333 572 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 PDCLQ13371 301 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 PTPN20Q4JDL3 420 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 SLC8B1Q6J4K2 584 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 LRRTM3Q86VH5 581 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 RHOT2Q8IXI1 618 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 DCP1BQ8IZD4 617 aaKnown RBP17.46■□□□□ 0.39
PMF1-206ENST00000606952 MSANTD4Q8NCY6 345 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 CPA5Q8WXQ8 436 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 SECISBP2LQ93073 1101 aaKnown RBP17.46■□□□□ 0.39
PMF1-206ENST00000606952 FUBP3Q96I24 572 aaKnown RBP eCLIP17.46■□□□□ 0.39
PMF1-206ENST00000606952 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
PMF1-206ENST00000606952 LPIN3Q9BQK8 851 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 ZBED2Q9BTP6 218 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 MIS12Q9H081 205 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 PNPLA8Q9NP80 782 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 LZTS1Q9Y250 596 aa17.46■□□□□ 0.39
PMF1-206ENST00000606952 COL4A4P53420 1690 aaPredicted RBP17.45■□□□□ 0.38
PMF1-206ENST00000606952 TMCO5BA8MYB1 307 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 C5orf67F2Z3F1 127 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 XPO1O14980 1071 aaKnown RBP17.45■□□□□ 0.38
PMF1-206ENST00000606952 ABL1P00519 1130 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
PMF1-206ENST00000606952 PDE4CQ08493 712 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 SHHQ15465 462 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 NFE2Q16621 373 aaPredicted RBP17.45■□□□□ 0.38
PMF1-206ENST00000606952 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 CFAP221Q4G0U5 840 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 CTXN3Q4LDR2 81 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 PLEKHA7Q6IQ23 1121 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 C4orf50Q6ZRC1 276 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 TAS1R1Q7RTX1 841 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 TMEM110Q86TL2 294 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 MYLPFQ96A32 169 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 SMARCD1Q96GM5 515 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 HSFY1Q96LI6 401 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 NOX5Q96PH1 765 aa17.45■□□□□ 0.38
PMF1-206ENST00000606952 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms