RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 MYBPHLA2RUH7 354 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SOBPA7XYQ1 873 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 LRRN2O75325 713 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SEC24AO95486 1093 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 VNN2O95498 520 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PDGFRBP09619 1106 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 OR4Q2P0C623 313 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CSH1P0DML2 217 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CSH2P0DML3 217 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 VDRP11473 427 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UCHL3P15374 230 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CD58P19256 250 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SLC9A1P19634 815 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ANXA13P27216 316 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RAD23BP54727 409 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 EPHA5P54756 1037 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 BPIFB4P59827 614 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MRPS5P82675 430 aaKnown RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UBXN1Q04323 297 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DUSP4Q13115 394 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SGO2Q562F6 1265 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FIGNQ5HY92 759 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MDH1BQ5I0G3 518 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ATAT1Q5SQI0 421 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 KLHDC7AQ5VTJ3 777 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 IQCEQ6IPM2 695 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ARHGEF19Q8IW93 802 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SLC4A11Q8NBS3 891 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ATAD1Q8NBU5 361 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RBBP8NLQ8NC74 664 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PPM1EQ8WY54 764 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SMG7Q92540 1137 aaKnown RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PSMG2Q969U7 264 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZNF707Q96C28 371 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 KREMEN1Q96MU8 473 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TMEM209Q96SK2 561 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NAA15Q9BXJ9 866 aaKnown RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 EDEM3Q9BZQ6 932 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CSNK1G1Q9HCP0 422 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 COMMD8Q9NX08 183 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UXTQ9UBK9 157 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 USTQ9Y2C2 406 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZFP37Q9Y6Q3 630 aaPredicted RBP10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 REV3LO60673 3130 aa10.07□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MYH10P35580 1976 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DENND4CQ5VZ89 1909 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZNF197O14709 1029 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MBTPS2O43462 519 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MED7O43513 233 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SLC34A2O95436 690 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CCDC172P0C7W6 258 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FAM200BP0CF97 657 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SETSIPP0DME0 302 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PTPN2P17706 415 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PPP3CCP48454 512 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 BCAT1P54687 386 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FANCCQ00597 558 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CYP27A1Q02318 531 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DLX2Q07687 328 aaPredicted RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TWF1Q12792 350 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 LRMPQ12912 555 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SYCP1Q15431 976 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MGAT5BQ3V5L5 792 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 RARS2Q5T160 578 aaKnown RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PTCRAQ6ISU1 281 aaPredicted RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DPY19L2P1Q6NXN4 242 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SARM1Q6SZW1 724 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TMEM270Q6UE05 265 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ACOT1Q86TX2 421 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FUKQ8N0W3 1084 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 OVCA2Q8WZ82 227 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 CYFIP2Q96F07 1278 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 MYRFLQ96LU7 910 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ZNF512Q96ME7 567 aaPredicted RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PGLYRP2Q96PD5 576 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TWNKQ96RR1 684 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NUP58Q9BVL2 599 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 LSM14BQ9BX40 385 aaKnown RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 UBXN6Q9BZV1 441 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 GANQ9H2C0 597 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DPEP3Q9H4B8 488 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PIDD1Q9HB75 910 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 WDR6Q9NNW5 1121 aaKnown RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 ASAH2Q9NR71 780 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 TMLHEQ9NVH6 421 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 HESX1Q9UBX0 185 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 HMGXB4Q9UGU5 601 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 USP15Q9Y4E8 981 aaPredicted RBP10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 PCDHB4Q9Y5E5 795 aa10.06□□□□□ -0.8
SQSTM1P1-201ENST00000603451 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms