RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 VSTM1Q6UX27 236 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 PDZD4Q76G19 769 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 GET4Q7L5D6 327 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 ACOT1Q86TX2 421 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 SCN4BQ8IWT1 228 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 PCED1BQ96HM7 432 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 FAM81BQ96LP2 452 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 ELOVL4Q9GZR5 314 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 NDST4Q9H3R1 872 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 CISHQ9NSE2 258 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 MRPS23Q9Y3D9 190 aaKnown RBP17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 GTPBP10A4D1E9 387 aaKnown RBP17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 BECN2A8MW95 431 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 TRIM66O15016 1216 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 CILPO75339 1184 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 SOAT2O75908 522 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 CSH1P0DML2 217 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 CSH2P0DML3 217 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 BDNFP23560 247 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 NTHL1P78549 312 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 GJD3Q8N144 294 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 CRYBG2Q8N1P7 616 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 AOPEPQ8N6M6 819 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 BPIFA3Q9BQP9 254 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 INTS2Q9H0H0 1204 aaKnown RBP17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 AVENQ9NQS1 362 aaPredicted RBP17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 FANCLQ9NW38 375 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 HCFC1R1Q9NWW0 138 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 CEP72Q9P209 647 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 NME7Q9Y5B8 376 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 ZFP37Q9Y6Q3 630 aaPredicted RBP17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 SPTBN5Q9NRC6 3674 aaKnown RBP17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 NOTCH4Q99466 2003 aa17.04■□□□□ 0.32
PPFIA3-213ENST00000602905 C5orf42Q9H799 3197 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 DOCK8Q8NF50 2099 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 MYO10Q9HD67 2058 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 LOC730098B7Z3J9 87 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 MYL4P12829 197 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 ZNF165P49910 485 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 ZSCAN23Q3MJ62 389 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 CDKAL1Q5VV42 579 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 DNAJB7Q7Z6W7 309 aaPredicted RBP17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 GIPC2Q8TF65 315 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 CEP295NLQ96MC4 621 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 NECAB3Q96P71 396 aaPredicted RBP17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 GCNAQ96QF7 691 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 CRACR2AQ9BSW2 395 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 EHD2Q9NZN4 543 aa17.03■□□□□ 0.32
PPFIA3-213ENST00000602905 C19orf67A6NJJ6 358 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 C2CD4DB7Z1M9 353 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 CAVIN2O95810 425 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 ATF6P18850 670 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 TPM4P67936 248 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 GCNT1Q02742 428 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 ORC1Q13415 861 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 DDR2Q16832 855 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 CCDC142Q17RM4 750 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 ZNF394Q53GI3 561 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 FKBP15Q5T1M5 1219 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 LMO3Q8TAP4 145 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 SMARCD1Q96GM5 515 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 TMEM176AQ96HP8 235 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 HEXIM2Q96MH2 286 aaKnown RBP17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 ARID3AQ99856 593 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 B3GNT5Q9BYG0 378 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 TAB2Q9NYJ8 693 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 UXTQ9UBK9 157 aaPredicted RBP17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 HMGXB4Q9UGU5 601 aa17.02■□□□□ 0.32
PPFIA3-213ENST00000602905 ZNF638Q14966 1978 aaKnown RBP17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 MICAL2O94851 1124 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 MFAP3P55082 362 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 TRIM65Q6PJ69 517 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 RRAGAQ7L523 313 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 FAM35AQ86V20 835 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 ZDHHC14Q8IZN3 488 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 HS6ST3Q8IZP7 471 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 FUCA2Q9BTY2 467 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 ZNF518BQ9C0D4 1074 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 FAM49BQ9NUQ9 324 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 CDH7Q9ULB5 785 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 MAGED2Q9UNF1 606 aaPredicted RBP17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 PCDHB4Q9Y5E5 795 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 GREB1Q4ZG55 1949 aa17.01■□□□□ 0.31
PPFIA3-213ENST00000602905 SLC38A8A6NNN8 435 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 CLDN5O00501 218 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 AP1G2O75843 785 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 FAM200BP0CF97 657 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 CCDC130P13994 396 aa17■□□□□ 0.31
PPFIA3-213ENST00000602905 ADORA2BP29275 332 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms