RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.51□□□□□ -1.85
SGMS1-207ENST00000602619 ZNF783Q6ZMS7 281 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 CCDC149Q6ZUS6 474 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 TICAM2Q86XR7 235 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 SRRM1Q8IYB3 904 aaKnown RBP3.51□□□□□ -1.85
SGMS1-207ENST00000602619 Q8N9P0 234 aaPredicted RBP3.51□□□□□ -1.85
SGMS1-207ENST00000602619 OR6B3Q8NGW1 331 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 SSH3Q8TE77 659 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 SNX19Q92543 992 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 P2RX7Q99572 595 aaKnown RBP3.51□□□□□ -1.85
SGMS1-207ENST00000602619 SLAMF7Q9NQ25 335 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 SLC52A1Q9NWF4 448 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 STK32BQ9NY57 414 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 TPCN1Q9ULQ1 816 aa3.51□□□□□ -1.85
SGMS1-207ENST00000602619 MTO1Q9Y2Z2 717 aaKnown RBP3.51□□□□□ -1.85
SGMS1-207ENST00000602619 USP19O94966 1318 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 ANO9A1A5B4 782 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 CFAP69A5D8W1 941 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 MBD3L4A6NDZ8 208 aaPredicted RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 MBD3L3A6NE82 208 aaPredicted RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 DNAJC9-AS1A6NH13 148 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 BTN3A1O00481 513 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 PRC1O43663 620 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 MAP4K4O95819 1239 aaPredicted RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 C1RP00736 705 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 GRPP07492 148 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 ATXN1LP0C7T5 689 aaKnown RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 KITP10721 976 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 GATA3P23771 443 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 PPIFP30405 207 aaKnown RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 SLC7A1P30825 629 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 PLA2G5P39877 138 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 NPTX2P47972 431 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 TM4SF4P48230 202 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 GCLCP48506 637 aaPredicted RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 NDUFV1P49821 464 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 SEC24CP53992 1094 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 LLGL1Q15334 1064 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 CNGA2Q16280 664 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 KIAA0753Q2KHM9 967 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 LONRF3Q496Y0 759 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 LMBRD2Q68DH5 695 aaPredicted RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 VWA1Q6PCB0 445 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 C11orf96Q7Z7L8 435 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 LCORLQ8N3X6 602 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 ZNF366Q8N895 744 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 FAM46DQ8NEK8 389 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 UBE2Q2Q8WVN8 375 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 SMG7Q92540 1137 aaKnown RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 MOGAT1Q96PD6 335 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 ZNF518BQ9C0D4 1074 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 ARNT2Q9HBZ2 717 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 XPNPEP3Q9NQH7 507 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 TBCCD1Q9NVR7 557 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 KCTD5Q9NXV2 234 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 XPR1Q9UBH6 696 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 AFF4Q9UHB7 1163 aaKnown RBP3.5□□□□□ -1.85
SGMS1-207ENST00000602619 CPA4Q9UI42 421 aa3.5□□□□□ -1.85
SGMS1-207ENST00000602619 TRGV11A0A075B6L2 103 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 TOR1BO14657 336 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 MGEA5O60502 916 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 CAND2O75155 1236 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 ESRRBO95718 433 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 HKR1P10072 659 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 XRCC6P12956 609 aaKnown RBP eCLIP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 KLRC1P26715 233 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 MPLP40238 635 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 AVPR1BP47901 424 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 KCNJ5P48544 419 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 ZNF134P52741 427 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 UCP3P55916 312 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 HTRA4P83105 476 aaPredicted RBP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 FMO1Q01740 532 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 ITIH3Q06033 890 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 SLC13A2Q13183 592 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 RAB32Q13637 225 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 PTPRRQ15256 657 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 NBPF8Q3BBV2 869 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 CD300EQ496F6 205 aaPredicted RBP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 SFRP4Q6FHJ7 346 aaPredicted RBP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 SMC5Q8IY18 1101 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 CCDC146Q8IYE0 955 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 NSUN7Q8NE18 718 aaKnown RBP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 PJA1Q8NG27 643 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 SLC9A6Q92581 669 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 PHKBQ93100 1093 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 TMEM125Q96AQ2 219 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 SLC46A1Q96NT5 459 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 STRBPQ96SI9 672 aaKnown RBP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 NELL2Q99435 816 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 COLEC11Q9BWP8 271 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 UNKQ9C0B0 810 aaKnown RBP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 ZNF700Q9H0M5 742 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 NUP62CLQ9H1M0 184 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 SMOC2Q9H3U7 446 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 COL20A1Q9P218 1284 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 BCCIPQ9P287 314 aaKnown RBP eCLIP3.49□□□□□ -1.85
SGMS1-207ENST00000602619 RAD54BQ9Y620 910 aa3.49□□□□□ -1.85
SGMS1-207ENST00000602619 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms