RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 MMEP08473 750 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 ADORA2BP29275 332 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 NDUFV1P49821 464 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 CNGA2Q16280 664 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 ARHGAP17Q68EM7 881 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 PDE12Q6L8Q7 609 aaKnown RBP21.71■■□□□ 1.07
PNKP-215ENST00000600910 RNF19BQ6ZMZ0 732 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 ZNF571Q7Z3V5 609 aaPredicted RBP21.71■■□□□ 1.07
PNKP-215ENST00000600910 ZNF677Q86XU0 584 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 FUKQ8N0W3 1084 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 PGLYRP2Q96PD5 576 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 CHP1Q99653 195 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 MED10Q9BTT4 135 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 EMILIN2Q9BXX0 1053 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 TSPAN16Q9UKR8 245 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.71■■□□□ 1.073e-6■■■■□ 21.1
PNKP-215ENST00000600910 TMEM265A0A087WTH1 108 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 CFHP08603 1231 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 CDR2Q01850 454 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 STILQ15468 1287 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 NFE2Q16621 373 aaPredicted RBP21.7■■□□□ 1.06
PNKP-215ENST00000600910 GOLGA7BQ2TAP0 167 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 C4orf50Q6ZRC1 276 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 PAQR9Q6ZVX9 377 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 SPATA2LQ8IUW3 424 aaPredicted RBP21.7■■□□□ 1.06
PNKP-215ENST00000600910 KLHL5Q96PQ7 755 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 HNRNPABQ99729 332 aaKnown RBP21.7■■□□□ 1.06
PNKP-215ENST00000600910 AGPAT1Q99943 283 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 SYT11Q9BT88 431 aa21.7■■□□□ 1.06
PNKP-215ENST00000600910 TTYH1Q9H313 450 aaPredicted RBP21.7■■□□□ 1.06
PNKP-215ENST00000600910 CHRNB2P17787 502 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 FECHP22830 423 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 CDK17Q00537 523 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 FMO1Q01740 532 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 RAB33AQ14088 237 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 LCLAT1Q6UWP7 414 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 RHOBTB2Q9BYZ6 727 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 ZNF518BQ9C0D4 1074 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 ABI2Q9NYB9 513 aaPredicted RBP21.69■■□□□ 1.06
PNKP-215ENST00000600910 PCDHGC3Q9UN70 934 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 MTMR11A4FU01 709 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 MICAL2O94851 1124 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 ADH1AP07327 375 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 SMARCB1Q12824 385 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 FAM35AQ86V20 835 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 PALB2Q86YC2 1186 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 LRRC8AQ8IWT6 810 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 ZNF461Q8TAF7 563 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 LRCH3Q96II8 777 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 BAG1Q99933 345 aaPredicted RBP21.69■■□□□ 1.06
PNKP-215ENST00000600910 PDCL3Q9H2J4 239 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 HESX1Q9UBX0 185 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 PCDHB5Q9Y5E4 795 aa21.69■■□□□ 1.06
PNKP-215ENST00000600910 M0QYV0 167 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 ABLIM3O94929 683 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 VNN2O95498 520 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 BDNFP23560 247 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 KLRC2P26717 231 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 EIF4A3P38919 411 aaKnown RBP21.68■■□□□ 1.06
PNKP-215ENST00000600910 ADCY1Q08828 1119 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 PTPROQ16827 1216 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 CFAP221Q4G0U5 840 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 TPGS2Q68CL5 300 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 CYP26C1Q6V0L0 522 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 TTC30AQ86WT1 665 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 TMEM139Q8IV31 216 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 PASD1Q8IV76 773 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 ATAD1Q8NBU5 361 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 OLIG1Q8TAK6 271 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 FUBP3Q96I24 572 aaKnown RBP eCLIP21.68■■□□□ 1.06
PNKP-215ENST00000600910 NHEJ1Q9H9Q4 299 aaPredicted RBP21.68■■□□□ 1.06
PNKP-215ENST00000600910 SEPT11Q9NVA2 429 aaKnown RBP21.68■■□□□ 1.06
PNKP-215ENST00000600910 ATG2AQ2TAZ0 1938 aa21.68■■□□□ 1.06
PNKP-215ENST00000600910 SSU72P8A0A1W2PR75 194 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 TNFAIP3P21580 790 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 MAPK8IP2Q13387 824 aaPredicted RBP21.67■■□□□ 1.06
PNKP-215ENST00000600910 DENND1BQ6P3S1 775 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 ANKRD52Q8NB46 1076 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 UBA3Q8TBC4 463 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 SPPL2BQ8TCT7 592 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 C2orf15Q8WU43 125 aaKnown RBP21.67■■□□□ 1.06
PNKP-215ENST00000600910 MRPL38Q96DV4 380 aaKnown RBP21.67■■□□□ 1.06
PNKP-215ENST00000600910 SMARCD1Q96GM5 515 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 DEF6Q9H4E7 631 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 PRDM12Q9H4Q4 367 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 KRT82Q9NSB4 513 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 AFF4Q9UHB7 1163 aaKnown RBP21.67■■□□□ 1.06
PNKP-215ENST00000600910 ATP8B3O60423 1300 aa21.67■■□□□ 1.06
PNKP-215ENST00000600910 AP1G2O75843 785 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 FAM200BP0CF97 657 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 ATF2P15336 505 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 CYP2F1P24903 491 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 CACNA2D1P54289 1103 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 PKDCCQ504Y2 493 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 TMTC1Q8IUR5 882 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 TTC9BQ8N6N2 239 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 CCDC42Q96M95 316 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 PCDHB18PQ96TA0 734 aa21.66■■□□□ 1.06
PNKP-215ENST00000600910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.66■■□□□ 1.06
PNKP-215ENST00000600910 CRISPLD1Q9H336 500 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms