RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RASA4O43374 803 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 NPTXRO95502 500 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 TTC4O95801 387 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 ERBB2P04626 1255 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 IL1R2P27930 398 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 GBP1P32455 592 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 MAGEA4P43358 317 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 PTPN11Q06124 597 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 SNAPC2Q13487 334 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 HIBCHQ6NVY1 386 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 OR6B3Q8NGW1 331 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 PIWIL1Q96J94 861 aaKnown RBP12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 OSMRQ99650 979 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 TXLNGYQ9BZA5 131 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 CXorf56Q9H5V9 222 aa12.14□□□□□ -0.47
ARHGEF1-220ENST00000600274 MICAL2O94851 1124 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 NUDT17P0C025 328 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 CLNS1AP54105 237 aaKnown RBP12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 CDH6P55285 790 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 PTK6Q13882 451 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 CCNG2Q16589 344 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 HADHQ16836 314 aaKnown RBP12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 RCOR2Q8IZ40 523 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 FBXO41Q8TF61 875 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 XYLT2Q9H1B5 865 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 WHRNQ9P202 907 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 STK38LQ9Y2H1 464 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 DOCK1Q14185 1865 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 H7C0C1 242 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 PPEF2O14830 753 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 NEFHP12036 1026 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 ADORA2BP29275 332 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 ATP5OP48047 213 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 TMEM174Q8WUU8 243 aa12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 STMN4Q9H169 189 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF1-220ENST00000600274 LIASO43766 372 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 AGTP01019 485 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 CETPP11597 493 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 MAN1A1P33908 653 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 GDF10P55107 478 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 YWHAEP62258 255 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 KRT81Q14533 505 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 SPRED3Q2MJR0 410 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 TFDP3Q5H9I0 405 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 TLCD1Q96CP7 247 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 CNOT10Q9H9A5 744 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 ALG13Q9NP73 1137 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 NKIRAS1Q9NYS0 192 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 ASB14A6NK59 587 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 E5RJQ4 531 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 LRCH4O75427 683 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 C22orf31O95567 290 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 RAD23BP54727 409 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 SURF1Q15526 300 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 CCDC62Q6P9F0 684 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 TSHZ1Q6ZSZ6 1077 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 TRMT10CQ7L0Y3 403 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 OR6J1Q8NGC5 347 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 IFT122Q9HBG6 1241 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 KLC4Q9NSK0 619 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 NAALADL1Q9UQQ1 740 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 MED7O43513 233 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 FAM189A1O60320 539 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 PPIL2Q13356 520 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 SLC10A6Q3KNW5 377 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 DARS2Q6PI48 645 aaKnown RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 TBC1D1Q86TI0 1168 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 CCDC197Q8NCU1 140 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 TMEM176AQ96HP8 235 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 B3GNT5Q9BYG0 378 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 FAM129AQ9BZQ8 928 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 FZD8Q9H461 694 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 DPP3Q9NY33 737 aa12.12□□□□□ -0.47
ARHGEF1-220ENST00000600274 EZRP15311 586 aaKnown RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 IVDP26440 423 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 MIPP30301 263 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 SSTR1P30872 391 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 AP3M2P53677 418 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 CCNA1P78396 465 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 ARHGAP1Q07960 439 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 PIGHQ14442 188 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 KCNV1Q6PIU1 500 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 C3orf20Q8ND61 904 aa12.11□□□□□ -0.47
ARHGEF1-220ENST00000600274 CFAP57Q96MR6 1250 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms