RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 TDP1Q9NUW8 608 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 R3HCC1Q9Y3T6 440 aaKnown RBP20.27■□□□□ 0.84
SNRPA-204ENST00000598452 DNAH14Q0VDD8 3507 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 CACNA1AO00555 2505 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 CEP250Q9BV73 2442 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 GABRDO14764 452 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 SPTLC2O15270 562 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 ARSAP15289 507 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 DDX6P26196 483 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 RPL10AP62906 217 aaKnown RBP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 AMPD3Q01432 767 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 SPEM2Q0P670 501 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 SIM2Q14190 667 aaPredicted RBP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 PKN3Q6P5Z2 889 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 SPATA2LQ8IUW3 424 aaPredicted RBP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 SCN4BQ8IWT1 228 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 DHX58Q96C10 678 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 ANKRD36BP1Q96IX9 119 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 ZNF396Q96N95 335 aaPredicted RBP20.26■□□□□ 0.83
SNRPA-204ENST00000598452 TRIM9Q9C026 710 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 TNMDQ9H2S6 317 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 CUEDC2Q9H467 287 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 TRPC7Q9HCX4 862 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 KBTBD4Q9NVX7 518 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 RALGAPA1Q6GYQ0 2036 aa20.26■□□□□ 0.83
SNRPA-204ENST00000598452 KIF26AQ9ULI4 1882 aaPredicted RBP20.25■□□□□ 0.83
SNRPA-204ENST00000598452 ZNF233A6NK53 670 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 NOL4O94818 638 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 PAPSS2O95340 614 aaPredicted RBP20.25■□□□□ 0.83
SNRPA-204ENST00000598452 LMO2P25791 158 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 LHX1P48742 406 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 PSMC1P62191 440 aaKnown RBP20.25■□□□□ 0.83
SNRPA-204ENST00000598452 ASIC1P78348 528 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 LAIR1Q6GTX8 287 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 FSTL4Q6MZW2 842 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 LONP2Q86WA8 852 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 TTC16Q8NEE8 873 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 SPATA18Q8TC71 538 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 KBTBD7Q8WVZ9 684 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 HPDLQ96IR7 371 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 SLC22A12Q96S37 553 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 CYP2S1Q96SQ9 504 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 BACH2Q9BYV9 841 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 HSPBP1Q9NZL4 362 aa20.25■□□□□ 0.83
SNRPA-204ENST00000598452 PCSK1P29120 753 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 ATXN1P54253 815 aaKnown RBP20.24■□□□□ 0.83
SNRPA-204ENST00000598452 LMNB2Q03252 620 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 MYO1EQ12965 1108 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 SURF1Q15526 300 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 FOXD4L6Q3SYB3 417 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-204ENST00000598452 TMEM196Q5HYL7 178 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 NAIF1Q69YI7 327 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-204ENST00000598452 SHC4Q6S5L8 630 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 FOXD4L3Q6VB84 417 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-204ENST00000598452 SYNPOQ8N3V7 929 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 RDH13Q8NBN7 331 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 MYRFLQ96LU7 910 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 SYT15Q9BQS2 421 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 KIF9Q9HAQ2 790 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 FBRSL1Q9HCM7 1045 aaKnown RBP20.24■□□□□ 0.83
SNRPA-204ENST00000598452 UXTQ9UBK9 157 aaPredicted RBP20.24■□□□□ 0.83
SNRPA-204ENST00000598452 OBSL1O75147 1896 aa20.24■□□□□ 0.83
SNRPA-204ENST00000598452 SOBPA7XYQ1 873 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 PPP6R2O75170 966 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 TNNC2P02585 160 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 PDGFRBP09619 1106 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 CASP1P29466 404 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 PXNP49023 591 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-204ENST00000598452 DUOXA2Q1HG44 320 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 CFAP221Q4G0U5 840 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 CC2D1AQ6P1N0 951 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-204ENST00000598452 FAM171BQ6P995 826 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 EPM2AIP1Q7L775 607 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-204ENST00000598452 LIMS2Q7Z4I7 341 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 MYLPFQ96A32 169 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 TRMT2BQ96GJ1 504 aaKnown RBP20.23■□□□□ 0.83
SNRPA-204ENST00000598452 CRTAC1Q9NQ79 661 aa20.23■□□□□ 0.83
SNRPA-204ENST00000598452 POLR3BQ9NW08 1133 aaPredicted RBP20.23■□□□□ 0.83
SNRPA-204ENST00000598452 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.23■□□□□ 0.83
SNRPA-204ENST00000598452 PRR5-ARHGAP8B1AHC4 643 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 TRDMT1O14717 391 aaKnown RBP20.22■□□□□ 0.83
SNRPA-204ENST00000598452 CLIC2O15247 247 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 TGFB1I1O43294 461 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 EGFP01133 1207 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 RETP07949 1114 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 ARHGAP8P85298 464 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 GRSF1Q12849 480 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNRPA-204ENST00000598452 ZNF268Q14587 947 aaPredicted RBP20.22■□□□□ 0.83
SNRPA-204ENST00000598452 MTF1Q14872 753 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 FAM26FQ5R3K3 315 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 DPH6Q7L8W6 267 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 ZNF507Q8TCN5 953 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 FUBP3Q96I24 572 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNRPA-204ENST00000598452 KIAA1586Q9HCI6 787 aa20.22■□□□□ 0.83
SNRPA-204ENST00000598452 CDV3Q9UKY7 258 aaKnown RBP20.22■□□□□ 0.83
SNRPA-204ENST00000598452 C2orf78A6NCI8 922 aa20.21■□□□□ 0.83
SNRPA-204ENST00000598452 EIF3DO15371 548 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNRPA-204ENST00000598452 CUTAO60888 179 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms