RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PAEPP09466 180 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 BDNFP23560 247 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 CYP2F1P24903 491 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 ADORA2BP29275 332 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 TUFMP49411 452 aaKnown RBP23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 SARM1Q6SZW1 724 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 SLC2A14Q8TDB8 520 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 CYFIP2Q96F07 1278 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 FUBP3Q96I24 572 aaKnown RBP eCLIP23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 APOL5Q9BWW9 433 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 RHOBTB2Q9BYZ6 727 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 CRISPLD1Q9H336 500 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 ABCB6Q9NP58 842 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 KIAA1257Q9ULG3 409 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 INSL5Q9Y5Q6 135 aa23.5■■□□□ 1.35
CHMP2A-204ENST00000597848 SOAT2O75908 522 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 LRG1P02750 347 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 PNMA6AP0CW24 399 aaPredicted RBP23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 HAPLN1P10915 354 aaPredicted RBP23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 VDRP11473 427 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 ALDH1A3P47895 512 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 DLX2Q07687 328 aaPredicted RBP23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 COL19A1Q14993 1142 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 CFAP221Q4G0U5 840 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 SGO2Q562F6 1265 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 SCN4BQ8IWT1 228 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 ZNF518BQ9C0D4 1074 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 SFXN1Q9H9B4 322 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 CLEC1BQ9P126 229 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 CEP72Q9P209 647 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 HSFX1Q9UBD0 423 aa23.49■■□□□ 1.35
CHMP2A-204ENST00000597848 CCDC195A0A1B0GUA6 201 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 CYP26A1O43174 497 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 AP5Z1O43299 807 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 TBX10O75333 385 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 RFPL2O75678 378 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 CALCAP01258 141 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 HOXB8P17481 243 aaPredicted RBP23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 LTBRP36941 435 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 GRIK1P39086 918 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 PBX1P40424 430 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 ZNF132P52740 706 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 RARS2Q5T160 578 aaKnown RBP23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 RTL10Q7L3V2 364 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 FAM35AQ86V20 835 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 FUKQ8N0W3 1084 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 HLA-CQ95604 372 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 HNRNPABQ99729 332 aaKnown RBP23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 NUP58Q9BVL2 599 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 UBE2ZQ9H832 354 aaPredicted RBP23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 ZDHHC7Q9NXF8 308 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 YIPF1Q9Y548 306 aa23.48■■□□□ 1.35
CHMP2A-204ENST00000597848 PLXNA3P51805 1871 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 F8VZ95 297 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 CCL16O15467 120 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 KCNA5P22460 613 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 STAT1P42224 750 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 MAGEA11P43364 429 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 RPL10AP62906 217 aaKnown RBP23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 TWF1Q12792 350 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 PLD1Q13393 1074 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 CLUL1Q15846 466 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 PPP1R26Q5T8A7 1209 aaPredicted RBP23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 SYCE2Q6PIF2 218 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 TMC5Q6UXY8 1006 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 FAM71AQ8IYT1 594 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 GPR88Q9GZN0 384 aa23.47■■□□□ 1.35
CHMP2A-204ENST00000597848 H3BQ06 376 aaPredicted RBP23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 HNRNPA1P09651 372 aaKnown RBP eCLIP23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 BRD2P25440 801 aaKnown RBP23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 EPHB3P54753 998 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 PTK2Q05397 1052 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 DDR2Q16832 855 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 ARHGAP17Q68EM7 881 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 SMYD5Q6GMV2 418 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 VSTM1Q6UX27 236 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 PAQR9Q6ZVX9 377 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 TFAP2BQ92481 460 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 SMARCD1Q96GM5 515 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 PIDD1Q9HB75 910 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 ACP6Q9NPH0 428 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 KRT82Q9NSB4 513 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 SZT2Q5T011 3432 aa23.46■■□□□ 1.35
CHMP2A-204ENST00000597848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 THAP12O43422 761 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 XYLBO75191 536 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 AP1G2O75843 785 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 GFPT2O94808 682 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 FAM200BP0CF97 657 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 ANXA13P27216 316 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 GNA15P30679 374 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 HOXA9P31269 272 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 CLCN1P35523 988 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 SOX5P35711 763 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 GPR15P49685 360 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 JAM2P57087 298 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 BPIFB4P59827 614 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 SDHAF4Q5VUM1 108 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 GPIHBP1Q8IV16 184 aa23.45■■□□□ 1.34
CHMP2A-204ENST00000597848 ELMOD1Q8N336 334 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 416.5 ms