RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 DDR2Q16832 855 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 FOXD4L6Q3SYB3 417 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 ADALQ6DHV7 355 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 FAM173BQ6P4H8 233 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 FOXD4L3Q6VB84 417 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 ECT2Q9H8V3 914 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 MAGED2Q9UNF1 606 aaPredicted RBP17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 INVSQ9Y283 1065 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 PCDHB5Q9Y5E4 795 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 STYXL1Q9Y6J8 313 aa17.72■□□□□ 0.43
SHKBP1-215ENST00000597649 BCLAF3A2AJT9 711 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 KPNA7A9QM74 516 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 PRPF40AO75400 957 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 CAVIN2O95810 425 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 PROS1P07225 676 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 SCP2P22307 547 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 DDIT3P35638 169 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 WNT7BP56706 349 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 ZNF268Q14587 947 aaPredicted RBP17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 PDGFRLQ15198 375 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 ARL6IP4Q66PJ3 421 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 SYT13Q7L8C5 426 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 MRPS31Q92665 395 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 ZHX3Q9H4I2 956 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 KIF9Q9HAQ2 790 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 CHMP5Q9NZZ3 219 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 EBF1Q9UH73 591 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 AGO2Q9UKV8 859 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 WASF3Q9UPY6 502 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 ZDHHC9Q9Y397 364 aa17.71■□□□□ 0.43
SHKBP1-215ENST00000597649 ANKRD11Q6UB99 2663 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 C4orf47A7E2U8 309 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 SOBPA7XYQ1 873 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 C1QTNF9BB2RNN3 333 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 BMP15O95972 392 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 C1QTNF9P0C862 333 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 CSH1P0DML2 217 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 CSH2P0DML3 217 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 CYP2F1P24903 491 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 ADSSP30520 456 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 AMPD2Q01433 879 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 CREB5Q02930 508 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 GRIN1Q05586 938 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 DMC1Q14565 340 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 MTF1Q14872 753 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 ZNF77Q15935 545 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 CCDC142Q17RM4 750 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 FBXO43Q4G163 708 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 CC2D1AQ6P1N0 951 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 PDCL2Q8N4E4 241 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 ZSWIM2Q8NEG5 633 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 PKMYT1Q99640 499 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 EDEM2Q9BV94 578 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 LINC00597Q9H2U6 94 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 DUS2Q9NX74 493 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 WNT6Q9Y6F9 365 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 DENND4CQ5VZ89 1909 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 PKD1L2Q7Z442 2459 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 GON4LQ3T8J9 2241 aa17.7■□□□□ 0.42
SHKBP1-215ENST00000597649 NOL4O94818 638 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 RHOBTB1O94844 696 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 APBB3O95704 486 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 TOP3BO95985 862 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 NOVA1P51513 510 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 EML3Q32P44 896 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 OSCP1Q8WVF1 389 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 RAD54LQ92698 747 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 CD101Q93033 1021 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 FAM84AQ96KN4 292 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 NBEAQ8NFP9 2946 aa17.69■□□□□ 0.42
SHKBP1-215ENST00000597649 LNP1A1A4G5 178 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 HCRTO43612 131 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 PLCG1P19174 1290 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 SPINK2P20155 84 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 ACAT1P24752 427 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 FAM160A1Q05DH4 1040 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 ELF2Q15723 593 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 SV2CQ496J9 727 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 ATL3Q6DD88 541 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 CPA6Q8N4T0 437 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 TTC16Q8NEE8 873 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 CXorf38Q8TB03 319 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 MYRFLQ96LU7 910 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 AK8Q96MA6 479 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 ST6GALNAC4Q9H4F1 302 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 TRPC7Q9HCX4 862 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 GCNT4Q9P109 453 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 TFIP11Q9UBB9 837 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 GTF3C4Q9UKN8 822 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 CFAP45Q9UL16 551 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 L1RE1Q9UN81 338 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
SHKBP1-215ENST00000597649 CDX4O14627 284 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-215ENST00000597649 SLC26A4O43511 780 aa17.67■□□□□ 0.42
SHKBP1-215ENST00000597649 KRT18P05783 430 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-215ENST00000597649 UBA7P41226 1012 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms