RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 RALGPS2Q86X27 583 aaPredicted RBP16.26■□□□□ 0.19
TGFB1-202ENST00000597453 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 MAB21L3Q8N8X9 362 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 USP13Q92995 863 aaPredicted RBP16.26■□□□□ 0.19
TGFB1-202ENST00000597453 ANKRD36BP1Q96IX9 119 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 FAM126AQ9BYI3 521 aaPredicted RBP16.26■□□□□ 0.19
TGFB1-202ENST00000597453 ABCB6Q9NP58 842 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 C2orf42Q9NWW7 574 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 NCDNQ9UBB6 729 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 ATG2BQ96BY7 2078 aa16.26■□□□□ 0.19
TGFB1-202ENST00000597453 FAM237AA0A1B0GTK4 181 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 A0A1W2PQ27 194 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 A0A1W2PQ64 194 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 A0A1W2PQD8 194 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 KIAA0391O15091 583 aaKnown RBP16.25■□□□□ 0.19
TGFB1-202ENST00000597453 EIF3DO15371 548 aaKnown RBP eCLIP16.25■□□□□ 0.19
TGFB1-202ENST00000597453 TGFB1I1O43294 461 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 NOL4O94818 638 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 PFKFB1P16118 471 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 CASP1P29466 404 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 CXCL12P48061 93 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 PLCB2Q00722 1185 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 AMPD3Q01432 767 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 DMWDQ09019 674 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 LRRC32Q14392 662 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 PON2Q15165 354 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 FAM26FQ5R3K3 315 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 CNNM4Q6P4Q7 775 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 LIMS2Q7Z4I7 341 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 SPEM1Q8N4L4 309 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 ZNF507Q8TCN5 953 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 KBTBD7Q8WVZ9 684 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 HPDLQ96IR7 371 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 C7orf25Q9BPX7 421 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 HPS4Q9NQG7 708 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 AGPAT3Q9NRZ7 376 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
TGFB1-202ENST00000597453 HELZP42694 1942 aaKnown RBP16.24■□□□□ 0.19
TGFB1-202ENST00000597453 OTOL1A6NHN0 477 aaPredicted RBP16.24■□□□□ 0.19
TGFB1-202ENST00000597453 ATP2C2O75185 946 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 TNNC2P02585 160 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 CSH1P0DML2 217 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 CSH2P0DML3 217 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 LMO2P25791 158 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 DDX6P26196 483 aaKnown RBP eCLIP16.24■□□□□ 0.19
TGFB1-202ENST00000597453 HOXC13P31276 330 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 AVPR1AP37288 418 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 LHX1P48742 406 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 PSMC1P62191 440 aaKnown RBP16.24■□□□□ 0.19
TGFB1-202ENST00000597453 RPL10AP62906 217 aaKnown RBP16.24■□□□□ 0.19
TGFB1-202ENST00000597453 FOXK2Q01167 660 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 EHHADHQ08426 723 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 CCINQ13939 588 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 CFAP221Q4G0U5 840 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 ERMP1Q7Z2K6 904 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 MON1AQ86VX9 555 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 SPATA18Q8TC71 538 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 SCFD1Q8WVM8 642 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 CHFRQ96EP1 664 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 FAM83CQ9BQN1 747 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 BLZF1Q9H2G9 400 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 GKN1Q9NS71 199 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
TGFB1-202ENST00000597453 ZMYM5Q9UJ78 669 aa16.24■□□□□ 0.19
TGFB1-202ENST00000597453 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 K7ESF4 209 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 PCSK1P29120 753 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 NRLP54845 237 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 PPP2R5DQ14738 602 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 SURF1Q15526 300 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 SNRNP35Q16560 246 aaKnown RBP16.23■□□□□ 0.19
TGFB1-202ENST00000597453 LPAL2Q16609 132 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 DGKKQ5KSL6 1271 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 FAM171BQ6P995 826 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 UNC13DQ70J99 1090 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 DPH6Q7L8W6 267 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 TRAPPC11Q7Z392 1133 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 SPATA2LQ8IUW3 424 aaPredicted RBP16.23■□□□□ 0.19
TGFB1-202ENST00000597453 WDR49Q8IV35 697 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 SCN4BQ8IWT1 228 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 NELFCDQ8IXH7 590 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 CEP57L1Q8IYX8 460 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 RDH13Q8NBN7 331 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 MRPS31Q92665 395 aaKnown RBP16.23■□□□□ 0.19
TGFB1-202ENST00000597453 TRMT2BQ96GJ1 504 aaKnown RBP16.23■□□□□ 0.19
TGFB1-202ENST00000597453 MYRFLQ96LU7 910 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 CRTAC1Q9NQ79 661 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 TDP1Q9NUW8 608 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
TGFB1-202ENST00000597453 SOBPA7XYQ1 873 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 CHURC1-FNTBB4DL54 471 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 CLIC2O15247 247 aa16.22■□□□□ 0.19
TGFB1-202ENST00000597453 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms