RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 NPHP3-ACAD11A0A0J9YXS1 232 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 PLS3P13797 630 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 GUCY2CP25092 1073 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 MATR3P43243 847 aaKnown RBP eCLIP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 ZXDBP98169 803 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 SEMA3BQ13214 749 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 ORC2Q13416 577 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 ZC2HC1CQ53FD0 456 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 USP39Q53GS9 565 aaKnown RBP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 C2orf27AQ580R0 203 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 CC2D1AQ6P1N0 951 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 SLC39A4Q6P5W5 647 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 MON1AQ86VX9 555 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 EFCAB13Q8IY85 973 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 TMEFF1Q8IYR6 380 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 CHCHD4Q8N4Q1 142 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 CPA6Q8N4T0 437 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 CCDC33Q8N5R6 958 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 TTC16Q8NEE8 873 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 OR2I1PQ8NGU4 316 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 SPPL2BQ8TCT7 592 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 ZDHHC4Q9NPG8 344 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 DUS2Q9NX74 493 aaKnown RBP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 MMP17Q9ULZ9 603 aa11.79□□□□□ -0.52
ZNF548-207ENST00000597400 MAGED2Q9UNF1 606 aaPredicted RBP11.79□□□□□ -0.52
ZNF548-207ENST00000597400 FAM221BA6H8Z2 402 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 DDX6P26196 483 aaKnown RBP eCLIP11.78□□□□□ -0.52
ZNF548-207ENST00000597400 P2RY2P41231 377 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 NCKAP1LP55160 1127 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 FAM160A1Q05DH4 1040 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 TRIM29Q14134 588 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 TAF12Q16514 161 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 CRY1Q16526 586 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 COL28A1Q2UY09 1125 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 WSCD1Q658N2 575 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 SCARA3Q6AZY7 606 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 MRPS31Q92665 395 aaKnown RBP11.78□□□□□ -0.52
ZNF548-207ENST00000597400 ATP2A3Q93084 1043 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 COL26A1Q96A83 441 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
ZNF548-207ENST00000597400 PI4K2AQ9BTU6 479 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 LINC00597Q9H2U6 94 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 TRPC7Q9HCX4 862 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 ZMYM5Q9UJ78 669 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 CPSF3Q9UKF6 684 aaKnown RBP11.78□□□□□ -0.52
ZNF548-207ENST00000597400 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
ZNF548-207ENST00000597400 C2orf78A6NCI8 922 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 TISP43B9A030 160 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 CYB561D2O14569 222 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 OGTO15294 1046 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 ITPKAP23677 461 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-207ENST00000597400 AMPD2Q01433 879 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 PDIA5Q14554 519 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 DDR2Q16832 855 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 PEAR1Q5VY43 1037 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-207ENST00000597400 SLC23A3Q6PIS1 610 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 RAB44Q7Z6P3 723 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-207ENST00000597400 PDZD3Q86UT5 571 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 C11orf74Q86VG3 221 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 TTC30AQ86WT1 665 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 LRRC15Q8TF66 581 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 C2orf15Q8WU43 125 aaKnown RBP11.77□□□□□ -0.53
ZNF548-207ENST00000597400 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 BICD1Q96G01 975 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 PNMA5Q96PV4 448 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 GCNT4Q9P109 453 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 CFAP46Q8IYW2 2715 aa11.77□□□□□ -0.53
ZNF548-207ENST00000597400 A0A0B4J269 797 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 UPK3BL1B0FP48 263 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 UPK3BL2E5RIL1 263 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 SGK1O00141 431 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 TNFRSF10BO14763 440 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 HNRNPDLO14979 420 aaKnown RBP11.76□□□□□ -0.53
ZNF548-207ENST00000597400 XPOTO43592 962 aaKnown RBP11.76□□□□□ -0.53
ZNF548-207ENST00000597400 HCRTO43612 131 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 NOL4O94818 638 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 CKMP06732 381 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 IFNAR2P48551 515 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 SLC12A3P55017 1021 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 SCAPQ12770 1279 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 LMAN2Q12907 356 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 TMEM132DQ14C87 1099 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 MAP7D1Q3KQU3 841 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 ARSHQ5FYA8 562 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 C12orf40Q86WS4 652 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 SYT12Q8IV01 421 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 ALLCQ8N6M5 410 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 ARL14EPQ8N8R7 260 aaPredicted RBP11.76□□□□□ -0.53
ZNF548-207ENST00000597400 IL17RCQ8NAC3 791 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 SH3RF2Q8TEC5 729 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 CAMK1GQ96NX5 476 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 NUSAP1Q9BXS6 441 aaKnown RBP11.76□□□□□ -0.53
ZNF548-207ENST00000597400 CCSER1Q9C0I3 900 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 IKZF4Q9H2S9 585 aa11.76□□□□□ -0.53
ZNF548-207ENST00000597400 FOXP1Q9H334 677 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms