RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 IL1BP01584 269 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 ETV4P43268 484 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 NPTX2P47972 431 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 AP2B1P63010 937 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 TRMT5Q32P41 509 aaKnown RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 ANKRD22Q5VYY1 191 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 CIAPIN1Q6FI81 312 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 SLC39A4Q6P5W5 647 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 B4GALNT2Q8NHY0 566 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 ECSITQ9BQ95 431 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 VCX3BQ9H321 246 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 VCX3AQ9NNX9 186 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
ZNF558-205ENST00000597304 PTPN7P35236 360 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 CPT1BQ92523 772 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 KMT5AQ9NQR1 393 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 GINM1Q9NU53 330 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 PCDHB4Q9Y5E5 795 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
ZNF558-205ENST00000597304 ASTN2O75129 1339 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 FAM237BA0A1B0GVD1 139 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 PTK7Q13308 1070 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 CNPY1Q3B7I2 92 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 LRRC38Q5VT99 294 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 PLA2G4FQ68DD2 849 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 TMEM270Q6UE05 265 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 TUBGCP5Q96RT8 1024 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 FNBP1Q96RU3 617 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 FAM213AQ9BRX8 229 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 WDR83Q9BRX9 315 aaKnown RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 CENPKQ9BS16 269 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 STRIP2Q9ULQ0 834 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 E7ESA3 106 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 HLA-DRAP01903 254 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 CRABP2P29373 138 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 PSMC4P43686 418 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 ENPEPQ07075 957 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 SPP2Q13103 211 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 UGCGQ16739 394 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 BBS9Q3SYG4 887 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 SPOPLQ6IQ16 392 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 MYLK4Q86YV6 388 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 NAT8LQ8N9F0 302 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 SLC35B2Q8TB61 432 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 ZNF516Q92618 1163 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-205ENST00000597304 PANX3Q96QZ0 392 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 CYTH2Q99418 400 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 SPATA16Q9BXB7 569 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
ZNF558-205ENST00000597304 TM7SF2O76062 418 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 ACO1P21399 889 aaKnown RBP13.18□□□□□ -0.3
ZNF558-205ENST00000597304 CDKN2BP42772 138 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 PSMC5P62195 406 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 MTM1Q13496 603 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 PDIK1LQ8N165 341 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 SERAC1Q96JX3 654 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 TTC1Q99614 292 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 IQCGQ9H095 443 aaKnown RBP13.18□□□□□ -0.3
ZNF558-205ENST00000597304 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
ZNF558-205ENST00000597304 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
ZNF558-205ENST00000597304 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 SLC4A7Q9Y6M7 1214 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 NRXN2Q9P2S2 1712 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 TMEM191CA6NGB0 347 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 CAPN14A8MX76 684 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 SPECC1L-ADORA2AF8WAN1 911 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 I3L4J1 428 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 KLF11O14901 512 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 BAG2O95816 211 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 INHBAP08476 426 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 TMEM191BP0C7N4 346 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 TSHRP16473 764 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 TNNI1P19237 187 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 CDK7P50613 346 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 RTP1P59025 263 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 ACTR3P61158 418 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 SLC18A2Q05940 514 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
ZNF558-205ENST00000597304 CDC16Q13042 620 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms