RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TMEM35BQ8NCS4 154 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 SPATA18Q8TC71 538 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 CYFIP2Q96F07 1278 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 SUSD3Q96L08 255 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 ISCUQ9H1K1 167 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 NENFQ9UMX5 172 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 PCDHGC3Q9UN70 934 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 TIMM13Q9Y5L4 95 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 MICAL3Q7RTP6 2002 aa13.86□□□□□ -0.19
SHKBP1-209ENST00000595803 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 GABRDO14764 452 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 PJA2O43164 708 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 B4GALT3O60512 393 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 GFRA3O60609 400 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 TUBB4AP04350 444 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 CYP1A1P04798 512 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 CYP11A1P05108 521 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 UNGP13051 313 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 TYMPP19971 482 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 ALDH7A1P49419 539 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 GALCP54803 685 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 PTPN5P54829 565 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 NAP1L1P55209 391 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 BCAR1P56945 870 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 BTG3Q14201 252 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 PTCRAQ6ISU1 281 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 PASD1Q8IV76 773 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 CMTR2Q8IYT2 770 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 ZBED2Q9BTP6 218 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 TAS2R14Q9NYV8 317 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 GUCA1BQ9UMX6 200 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 TFR2Q9UP52 801 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 DCHS1Q96JQ0 3298 aa13.85□□□□□ -0.19
SHKBP1-209ENST00000595803 A0A0U1RQJ8 604 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 CARNS1A5YM72 827 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ANKRD62A6NC57 917 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 RCCD1A6NED2 376 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 KIF5CO60282 957 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 MICAL2O94851 1124 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 LSM8O95777 96 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ITGB1P05556 798 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 CFHP08603 1231 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 TMEM253P0C7T8 217 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 PTPN1P18031 435 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 PCSK1P29120 753 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ARHGAP25P42331 645 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 NSFP46459 744 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 GPC5P78333 572 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ELAVL2Q12926 359 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ARHGAP17Q68EM7 881 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 DENND1BQ6P3S1 775 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 LCLAT1Q6UWP7 414 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 DNAAF5Q86Y56 855 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 PALB2Q86YC2 1186 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 OLIG1Q8TAK6 271 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ATRIPQ8WXE1 791 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 CPA5Q8WXQ8 436 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 CTNNBL1Q8WYA6 563 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 SLC9A7Q96T83 725 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 YME1L1Q96TA2 773 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ZSWIM1Q9BR11 485 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 PACSIN1Q9BY11 444 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 LACRTQ9GZZ8 138 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 LHX5Q9H2C1 402 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 DPEP3Q9H4B8 488 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 CWH43Q9H720 699 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ADAM28Q9UKQ2 775 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 CDH9Q9ULB4 789 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 PAXBP1Q9Y5B6 917 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 NME7Q9Y5B8 376 aa13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 ZFHX2Q9C0A1 2572 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-209ENST00000595803 FAM170AA1A519 330 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 NT5C1B-RDH14C9J2C7 533 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 F8W810 466 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 KIF2AO00139 706 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 O00370 1275 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 SYN3O14994 580 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 HCRTO43612 131 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 ABCB4P21439 1286 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 ACAT1P24752 427 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 NOP2P46087 812 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 NOMO3P69849 1222 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 YWHAHQ04917 246 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 DNTTIP2Q5QJE6 756 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 PPP1R26Q5T8A7 1209 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 LIN9Q5TKA1 542 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 FAM171A1Q5VUB5 890 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 OVOS1Q6IE37 1185 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 RNF10Q8N5U6 811 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 UBA3Q8TBC4 463 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms