RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 NEK3P51956 506 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CDK16Q00536 496 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 OGDHQ02218 1023 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 TFDP1Q14186 410 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 ANKMY2Q8IV38 441 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 FNIP1Q8TF40 1166 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CDHR1Q96JP9 859 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 MCEEQ96PE7 176 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 MIPEPQ99797 713 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 FAM167BQ9BTA0 163 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 TMEM121Q9BTD3 319 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 TSSK1BQ9BXA7 367 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 IMPG2Q9BZV3 1241 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 SPATS2LQ9NUQ6 558 aaKnown RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 TRPC5Q9UL62 973 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 STRIP2Q9ULQ0 834 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 ADGRA2Q96PE1 1338 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.89□□□□□ -0.19
VRK3-209ENST00000594948 A0A0B4J269 797 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 A8MXQ7 604 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 F8VP50 259 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 GSC2O15499 205 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 AHCYL1O43865 530 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 FESP07332 822 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 SSTR1P30872 391 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 ETV4P43268 484 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 ACOT2P49753 483 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 PRKCEQ02156 737 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 CDK18Q07002 472 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 NCOA4Q13772 614 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 PRKD1Q15139 912 aaPredicted RBP13.89□□□□□ -0.19
VRK3-209ENST00000594948 C11orf91Q3C1V1 193 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 XKR3Q5GH77 459 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 C3orf62Q6ZUJ4 267 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 ARHGAP24Q8N264 748 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 RFWD2Q8NHY2 731 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
VRK3-209ENST00000594948 APOPT1Q96IL0 206 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 FAM84AQ96KN4 292 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 CYTH2Q99418 400 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 MAF1Q9H063 256 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 TMEM134Q9H6X4 195 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 SLC24A3Q9HC58 644 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 HEY2Q9UBP5 337 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 LRCH1Q9Y2L9 728 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 RLFQ13129 1914 aa13.89□□□□□ -0.19
VRK3-209ENST00000594948 SIGLEC16A6NMB1 481 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 ENTPD5O75356 428 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 STAM2O75886 525 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
VRK3-209ENST00000594948 MT-ND3P03897 115 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 ATP5BP06576 529 aaKnown RBP13.88□□□□□ -0.19
VRK3-209ENST00000594948 RPL22P35268 128 aaKnown RBP13.88□□□□□ -0.19
VRK3-209ENST00000594948 OTUD4Q01804 1114 aaKnown RBP13.88□□□□□ -0.19
VRK3-209ENST00000594948 PLCB3Q01970 1234 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 EMC2Q15006 297 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 HADHQ16836 314 aaKnown RBP13.88□□□□□ -0.19
VRK3-209ENST00000594948 MUM1Q2TAK8 710 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 HP1BP3Q5SSJ5 553 aaPredicted RBP13.88□□□□□ -0.19
VRK3-209ENST00000594948 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 TRIM68Q6AZZ1 485 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 SWSAP1Q6NVH7 229 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 ABHD15Q6UXT9 468 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 CAPN12Q6ZSI9 719 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 PALM2Q8IXS6 379 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 PDIK1LQ8N165 341 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 FBXO36Q8NEA4 188 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 APBB2Q92870 758 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 FAM136AQ96C01 138 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 VCXQ9H320 206 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 PNPLA8Q9NP80 782 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 ARL8BQ9NVJ2 186 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 PHIPQ8WWQ0 1821 aa13.88□□□□□ -0.19
VRK3-209ENST00000594948 LPXNO60711 386 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 IFNB1P01574 187 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 NR3C2P08235 984 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 CDC25CP30307 473 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SLC25A11Q02978 314 aaKnown RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 SLC34A1Q06495 639 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 CCDC6Q16204 474 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 ANKRD22Q5VYY1 191 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 NAIF1Q69YI7 327 aaPredicted RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 TRMT1LQ7Z2T5 733 aaKnown RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 TRIM42Q8IWZ5 723 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 ACTL9Q8TC94 416 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 WDR83Q9BRX9 315 aaKnown RBP13.87□□□□□ -0.19
VRK3-209ENST00000594948 MSTO1Q9BUK6 570 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 TMEM39BQ9GZU3 492 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 PORCNQ9H237 461 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 SYNCQ9H7C4 482 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 KCNK13Q9HB14 408 aa13.87□□□□□ -0.19
VRK3-209ENST00000594948 JPH1Q9HDC5 661 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms