RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 CYP3A43Q9HB55 503 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 IGSF9Q9P2J2 1179 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 SORCS3Q9UPU3 1222 aa15.52■□□□□ 0.08
VRK3-206ENST00000594090 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ANHXE9PGG2 379 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 PMM2O15305 246 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 CCDC192P0DO97 292 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 BDNFP23560 247 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ERCC5P28715 1186 aaPredicted RBP15.51■□□□□ 0.07
VRK3-206ENST00000594090 MTMR3Q13615 1198 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 DDR2Q16832 855 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 CCDC183Q5T5S1 534 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 SDHAF4Q5VUM1 108 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 POTEHQ6S545 545 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 VSTM1Q6UX27 236 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 UNC93AQ86WB7 457 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 STKLD1Q8NE28 680 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 SHKBP1Q8TBC3 707 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 CNOT6LQ96LI5 555 aaKnown RBP15.51■□□□□ 0.07
VRK3-206ENST00000594090 GDE1Q9NZC3 331 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 NCOR1O75376 2440 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 FGF19O95750 216 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 GJA1P17302 382 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ZXDAP98168 799 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ORC1Q13415 861 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 TEAD2Q15562 447 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 TAF12Q16514 161 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 GAREM2Q75VX8 874 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 MTSS1LQ765P7 747 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ACOT1Q86TX2 421 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 SCN4BQ8IWT1 228 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 RSAD2Q8WXG1 361 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 EDAQ92838 391 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 TATDN2Q93075 761 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 NXPE3Q969Y0 559 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 MCRS1Q96EZ8 462 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 B3GNT5Q9BYG0 378 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ZNF518BQ9C0D4 1074 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 SMOC2Q9H3U7 446 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 IL21Q9HBE4 155 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.51■□□□□ 0.07
VRK3-206ENST00000594090 NUMBLQ9Y6R0 609 aa15.51■□□□□ 0.07
VRK3-206ENST00000594090 CLDN5O00501 218 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 TRIM66O15016 1216 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 P4HA2O15460 535 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 CILPO75339 1184 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 AFPP02771 609 aaKnown RBP15.5■□□□□ 0.07
VRK3-206ENST00000594090 CSH1P0DML2 217 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 CSH2P0DML3 217 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 HMGA1P17096 107 aaKnown RBP15.5■□□□□ 0.07
VRK3-206ENST00000594090 CD58P19256 250 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 GABRR2P28476 465 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 GRIK1P39086 918 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 KCNH2Q12809 1159 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 TDGQ13569 410 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 TPD52L1Q16890 204 aaPredicted RBP15.5■□□□□ 0.07
VRK3-206ENST00000594090 PARM1Q6UWI2 310 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 IRF2BP1Q8IU81 584 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 UBALD2Q8IYN6 164 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 ST13P5Q8NFI4 369 aaPredicted RBP15.5■□□□□ 0.07
VRK3-206ENST00000594090 FGF14Q92915 247 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 TWNKQ96RR1 684 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 ARID3AQ99856 593 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 THAP9Q9H5L6 903 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 DUSP12Q9UNI6 340 aa15.5■□□□□ 0.07
VRK3-206ENST00000594090 GREB1Q4ZG55 1949 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 OBSL1O75147 1896 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 ATP8B3O60423 1300 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 SLC38A8A6NNN8 435 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 NOL4O94818 638 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 ANXA13P27216 316 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 CACNA2D1P54289 1103 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 CETN1Q12798 172 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 CT47A1Q5JQC4 288 aaPredicted RBP15.49■□□□□ 0.07
VRK3-206ENST00000594090 FAM35AQ86V20 835 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 CRYBG2Q8N1P7 616 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 SPATA17Q96L03 361 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 ASB16Q96NS5 453 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 NT5C1AQ9BXI3 368 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 C1QTNF1Q9BXJ1 281 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 ATXN3LQ9H3M9 355 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 C11orf16Q9NQ32 467 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 TMEM63CQ9P1W3 806 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 UXTQ9UBK9 157 aaPredicted RBP15.49■□□□□ 0.07
VRK3-206ENST00000594090 MAGED2Q9UNF1 606 aaPredicted RBP15.49■□□□□ 0.07
VRK3-206ENST00000594090 MYO10Q9HD67 2058 aa15.49■□□□□ 0.07
VRK3-206ENST00000594090 FAM86C2PA6NEL3 165 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 F8VP50 259 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 CCDC130P13994 396 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 TRIM21P19474 475 aaKnown RBP15.48■□□□□ 0.07
VRK3-206ENST00000594090 CDC25CP30307 473 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 SIGLEC14Q08ET2 396 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 CUL2Q13617 745 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 STXBP5Q5T5C0 1151 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 SASS6Q6UVJ0 657 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 PAQR9Q6ZVX9 377 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 CREBRFQ8IUR6 639 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms