RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 TRDMT1O14717 391 aaKnown RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 SLC30A4O14863 429 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 LRP3O75074 770 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 RNF40O75150 1001 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 ATP2C2O75185 946 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 PRPF40AO75400 957 aaKnown RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 PRPF6O94906 941 aaKnown RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 GAP43P17677 238 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 GARTP22102 1010 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 SMARCB1Q12824 385 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 PPP2R5DQ14738 602 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 CCDC6Q16204 474 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 CSRP2Q16527 193 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 RRAGBQ5VZM2 374 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 MON1AQ86VX9 555 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 NT5DC4Q86YG4 428 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 ABCA7Q8IZY2 2146 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 LRRC52Q8N7C0 313 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 TRMT2BQ96GJ1 504 aaKnown RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 GCNAQ96QF7 691 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 CYP2S1Q96SQ9 504 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 PANK2Q9BZ23 570 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 GZF1Q9H116 711 aaPredicted RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 TDP1Q9NUW8 608 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 TMEM30AQ9NV96 361 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 GCNT4Q9P109 453 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 MTMR6Q9Y217 621 aa11.46□□□□□ -0.57
USE1-203ENST00000593597 MORC2Q9Y6X9 1032 aaPredicted RBP11.46□□□□□ -0.57
USE1-203ENST00000593597 CHD6Q8TD26 2715 aa11.46□□□□□ -0.58
USE1-203ENST00000593597 THADAQ6YHU6 1953 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 PLXND1Q9Y4D7 1925 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 AKAP13Q12802 2813 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 ADRB1P08588 477 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CSH1P0DML2 217 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CSH2P0DML3 217 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
USE1-203ENST00000593597 IDEP14735 1019 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 LMO2P25791 158 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CNR2P34972 360 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 GJA4P35212 333 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 AVPR1AP37288 418 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 PNPLA4P41247 253 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 PSMC1P62191 440 aaKnown RBP11.45□□□□□ -0.58
USE1-203ENST00000593597 TSPY1Q01534 308 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 ZNF268Q14587 947 aaPredicted RBP11.45□□□□□ -0.58
USE1-203ENST00000593597 MTF1Q14872 753 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 POSTNQ15063 836 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 SF3A2Q15428 464 aaKnown RBP11.45□□□□□ -0.58
USE1-203ENST00000593597 E2F4Q16254 413 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CFAP221Q4G0U5 840 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 SV2BQ7L1I2 683 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 KBTBD6Q86V97 674 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CBWD2Q8IUF1 395 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 ADGRF2Q8IZF7 708 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 NETO1Q8TDF5 533 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 MYRFLQ96LU7 910 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 SMOC1Q9H4F8 434 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CRTAC1Q9NQ79 661 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 PANK4Q9NVE7 773 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 ITGA11Q9UKX5 1188 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 RAB23Q9ULC3 237 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 WNT6Q9Y6F9 365 aa11.45□□□□□ -0.58
USE1-203ENST00000593597 WDFY3Q8IZQ1 3526 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 KRT37O76014 449 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 EPN2O95208 641 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 DDX6P26196 483 aaKnown RBP eCLIP11.44□□□□□ -0.58
USE1-203ENST00000593597 STAT6P42226 847 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 RAP1GAPP47736 663 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 GALK1P51570 392 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 CACNA2D1P54289 1103 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 USP46P62068 366 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 SLC39A14Q15043 492 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 NFE2Q16621 373 aaPredicted RBP11.44□□□□□ -0.58
USE1-203ENST00000593597 EML3Q32P44 896 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 GPD1LQ8N335 351 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 TOP6BLQ8N6T0 577 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 PDILTQ8N807 584 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 ARL14EPQ8N8R7 260 aaPredicted RBP11.44□□□□□ -0.58
USE1-203ENST00000593597 GAB3Q8WWW8 586 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 MRPS31Q92665 395 aaKnown RBP11.44□□□□□ -0.58
USE1-203ENST00000593597 MYLPFQ96A32 169 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 HHIPQ96QV1 700 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 ECT2Q9H8V3 914 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 KIF9Q9HAQ2 790 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 THG1LQ9NWX6 298 aaKnown RBP11.44□□□□□ -0.58
USE1-203ENST00000593597 EXOC7Q9UPT5 735 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
USE1-203ENST00000593597 ZZEF1O43149 2961 aa11.43□□□□□ -0.58
USE1-203ENST00000593597 CEP192Q8TEP8 1941 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms