RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PDXDC1Q6P996 788 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 TMEM270Q6UE05 265 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ACOT1Q86TX2 421 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 RNF135Q8IUD6 432 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 C12orf29Q8N999 325 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 SLC4A11Q8NBS3 891 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 SLC20A1Q8WUM9 679 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 TFAP2BQ92481 460 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 SHC3Q92529 594 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 PKMYT1Q99640 499 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 TMEM30AQ9NV96 361 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 DDX43Q9NXZ2 648 aaKnown RBP10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CEP72Q9P209 647 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 FNIP2Q9P278 1114 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 MUTYHQ9UIF7 546 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 FBXL5Q9UKA1 691 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 CDY1Q9Y6F8 540 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 ITIH6Q6UXX5 1313 aa10.28□□□□□ -0.76
DDX39A-220ENST00000593008 A8MXQ7 604 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 LOC730098B7Z3J9 87 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 CLDN5O00501 218 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 GABRDO14764 452 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 TACC1O75410 805 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 PLEKP08567 350 aaPredicted RBP10.27□□□□□ -0.77
DDX39A-220ENST00000593008 SKILP12757 684 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 TYMPP19971 482 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 MTHFRP42898 656 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 GPR15P49685 360 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 MRE11P49959 708 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 YWHAHQ04917 246 aaPredicted RBP10.27□□□□□ -0.77
DDX39A-220ENST00000593008 MRPL58Q14197 206 aaKnown RBP10.27□□□□□ -0.77
DDX39A-220ENST00000593008 CTXN3Q4LDR2 81 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 MDH1BQ5I0G3 518 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 TAF3Q5VWG9 929 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 LILRA6Q6PI73 481 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 GPR149Q86SP6 731 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 SLC47A2Q86VL8 602 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 DNAAF5Q86Y56 855 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 KREMEN2Q8NCW0 462 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 MYLPFQ96A32 169 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 RIPOR3Q96MK2 946 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 SYT15Q9BQS2 421 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 SNX25Q9H3E2 840 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 MTRRQ9UBK8 725 aa10.27□□□□□ -0.77
DDX39A-220ENST00000593008 PLXNA3P51805 1871 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 C2CD4DB7Z1M9 353 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 SYN3O14994 580 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 DCXO43602 365 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 TBC1D4O60343 1298 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 MFAP3LO75121 409 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 OAZ2O95190 189 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 TBXAS1P24557 533 aaPredicted RBP10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ADORA2BP29275 332 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 CLCN1P35523 988 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ROR1Q01973 937 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 SLC39A12Q504Y0 691 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 INTS6LQ5JSJ4 861 aaKnown RBP10.26□□□□□ -0.77
DDX39A-220ENST00000593008 SDHAF4Q5VUM1 108 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ZNF280DQ6N043 979 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ANKS3Q6ZW76 656 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 CACNA2D4Q7Z3S7 1137 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
DDX39A-220ENST00000593008 PASD1Q8IV76 773 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 GPR65Q8IYL9 337 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 FAM71AQ8IYT1 594 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 TC2NQ8N9U0 490 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 SMG7Q92540 1137 aaKnown RBP10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ZNF707Q96C28 371 aaPredicted RBP10.26□□□□□ -0.77
DDX39A-220ENST00000593008 STK33Q9BYT3 514 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ZNF518BQ9C0D4 1074 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 ZCWPW1Q9H0M4 648 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 CYP3A43Q9HB55 503 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 PIDD1Q9HB75 910 aa10.26□□□□□ -0.77
DDX39A-220ENST00000593008 WDR27A2RRH5 827 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 PI4K2BG5E9Z4 385 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 TULP2O00295 520 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 CCL16O15467 120 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 ZMYND10O75800 440 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 TPM3P06753 285 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 C8AP07357 584 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 P4HA1P13674 534 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 CD19P15391 556 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 CHRNB2P17787 502 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 PAX3P23760 479 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 CDC25BP30305 580 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 SOX5P35711 763 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 GNL1P36915 607 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-220ENST00000593008 MFAP3P55082 362 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 RAB33AQ14088 237 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 GOLGA7BQ2TAP0 167 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 PPM1LQ5SGD2 360 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 LIN9Q5TKA1 542 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 DENND1BQ6P3S1 775 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
DDX39A-220ENST00000593008 WDR59Q6PJI9 974 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms