RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 BIRC5O15392 142 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MAGEB2O15479 319 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GPC4O75487 556 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SMNDC1O75940 238 aaKnown RBP eCLIP3.69□□□□□ -1.82
VMP1-216ENST00000592790 TMCC1O94876 653 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 IL18RAPO95256 599 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ENO1P06733 434 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 VIL1P09327 827 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 NCF2P19878 526 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 TAC1P20366 129 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ACAT1P24752 427 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 HADHAP40939 763 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 BCAR1P56945 870 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RTP1P59025 263 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PSMC1P62191 440 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 DYNLT1P63172 113 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MAPK6Q16659 721 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 BOLA3Q53S33 107 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ARSHQ5FYA8 562 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PPP1R15BQ5SWA1 713 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 KYAT3Q6YP21 454 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 ANKS1BQ7Z6G8 1248 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PRUNE1Q86TP1 453 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 NOP9Q86U38 636 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 PRPF39Q86UA1 669 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 PHF13Q86YI8 300 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 PASD1Q8IV76 773 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CROCCP3Q8IVE0 287 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ASAP3Q8TDY4 903 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 NSUN6Q8TEA1 469 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 SCG3Q8WXD2 468 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 ACAP3Q96P50 834 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 UNC45AQ9H3U1 944 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ZWILCHQ9H900 591 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 DMAC2Q9NW81 257 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CHCHD3Q9NX63 227 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 SOX13Q9UN79 622 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MYH13Q9UKX3 1938 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 H3BRJ5 948 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GIPC1O14908 333 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 TGFB1I1O43294 461 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PLA2G6O60733 806 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PSMD10O75832 226 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ESRRBO95718 433 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 THRAP10827 490 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SHMT1P34896 483 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 FLT3P36888 993 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 FDFT1P37268 417 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MAGEA8P43361 318 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CDK7P50613 346 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 IFRD2Q12894 506 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 NFIXQ14938 502 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 KBTBD12Q3ZCT8 623 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CBWD6Q4V339 395 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CBWD3Q5JTY5 395 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RABGAP1LQ5R372 815 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CBWD5Q5RIA9 395 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GJC2Q5T442 439 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 CWF19L1Q69YN2 538 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 SCYL2Q6P3W7 929 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ZDHHC24Q6UX98 284 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 FAM196AQ6ZSG2 479 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CHSY1Q86X52 802 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 IFNL1Q8IU54 200 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ANKMY2Q8IV38 441 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MAP4K3Q8IVH8 894 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ALLCQ8N6M5 410 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 LINC00116Q8NCU8 138 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 STKLD1Q8NE28 680 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ACMSDQ8TDX5 336 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CPA5Q8WXQ8 436 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ALG3Q92685 438 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 DLG3Q92796 817 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PBXIP1Q96AQ6 731 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SDCCAG3Q96C92 435 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ZBTB10Q96DT7 871 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CATSPER2Q96P56 530 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RMDN3Q96TC7 470 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CGRRF1Q99675 332 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 HSD17B14Q9BPX1 270 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 THTPAQ9BU02 230 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 KIFC3Q9BVG8 833 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 NIF3L1Q9GZT8 377 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 KIAA1683Q9H0B3 1180 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 POLR3FQ9H1D9 316 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 ACSS3Q9H6R3 686 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 NRDE2Q9H7Z3 1164 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RPF1Q9H9Y2 349 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 THAP1Q9NVV9 213 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PAPPAQ13219 1627 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 DDX60Q8IY21 1712 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 NUP98P52948 1817 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 IGKV6D-41A0A0C4DH26 115 aa3.68□□□□□ -1.82
VMP1-216ENST00000592790 CHADO15335 359 aa3.68□□□□□ -1.82
VMP1-216ENST00000592790 ICAM1P05362 532 aa3.68□□□□□ -1.82
VMP1-216ENST00000592790 SPATA31C1P0DKV0 1188 aa3.68□□□□□ -1.82
VMP1-216ENST00000592790 MYL2P10916 166 aa3.68□□□□□ -1.82
VMP1-216ENST00000592790 VEGFAP15692 232 aaPredicted RBP3.68□□□□□ -1.82
VMP1-216ENST00000592790 TGM2P21980 687 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms