RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 TRPC3Q13507 836 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 BECN1Q14457 450 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 ZNF528Q3MIS6 628 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 WDR72Q3MJ13 1102 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 ARHGAP29Q52LW3 1261 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 VSTM1Q6UX27 236 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 FRMD5Q7Z6J6 570 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 CMTM8Q8IZV2 173 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 CELF5Q8N6W0 485 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 NKD2Q969F2 451 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 SYAP1Q96A49 352 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 MSANTD3Q96H12 275 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 ANP32EQ9BTT0 268 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 XYLT2Q9H1B5 865 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 SNX25Q9H3E2 840 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 C8orf33Q9H7E9 229 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 VRTNQ9H8Y1 702 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 THG1LQ9NWX6 298 aaKnown RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 MAGEC2Q9UBF1 373 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 UXTQ9UBK9 157 aaPredicted RBP10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 FBXO4Q9UKT5 387 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 TRAF3IP3Q9Y228 551 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 PIAS3Q9Y6X2 628 aa10.38□□□□□ -0.75
PRKCSH-215ENST00000592435 CACNA1HO95180 2353 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 SLC38A8A6NNN8 435 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 IKBKBO14920 756 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 LAMTOR5O43504 91 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 HCRTO43612 131 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 PHACTR2O75167 634 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 ZNF202O95125 648 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 PRAMEF12O95522 483 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 C4BPAP04003 597 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 NR3C1P04150 777 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 SP9P0CG40 484 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 AVPR1AP37288 418 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 GPR15P49685 360 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 MYL6P60660 151 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 TNNC1P63316 161 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 CYP4F8P98187 520 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 PLCB2Q00722 1185 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 DPYDQ12882 1025 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 KCNB1Q14721 858 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 KRBA2Q6ZNG9 492 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 ASCL5Q7RTU5 278 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 MON1AQ86VX9 555 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 GPIHBP1Q8IV16 184 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 FSIP1Q8NA03 581 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 MYCBPAPQ8TBZ2 947 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 TMC2Q8TDI7 906 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 BPIFB1Q8TDL5 484 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 CSGALNACT1Q8TDX6 532 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 FAM3CQ92520 227 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 MRPS31Q92665 395 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 CCDC34Q96HJ3 373 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 SPATA17Q96L03 361 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 IPO9Q96P70 1041 aaKnown RBP10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 CRTAC1Q9NQ79 661 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 TDP1Q9NUW8 608 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 SPATA6Q9NWH7 488 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 MAGED2Q9UNF1 606 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 FRMD4BQ9Y2L6 1034 aa10.37□□□□□ -0.75
PRKCSH-215ENST00000592435 PRR23AA6NEV1 266 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 MAPK13O15264 365 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 CALUO43852 315 aaPredicted RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 PTPN1P18031 435 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 BDNFP23560 247 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 CCNE1P24864 410 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 CASP4P49662 377 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 KPNA1P52294 538 aaPredicted RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 NUCB2P80303 420 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 NCOA4Q13772 614 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 NFIL3Q16649 462 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 CCDC142Q17RM4 750 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 SDHAF4Q5VUM1 108 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 TDRD10Q5VZ19 366 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 TXNDC8Q6A555 127 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 ZC3H14Q6PJT7 736 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 RALGPS2Q86X27 583 aaPredicted RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 SCN4BQ8IWT1 228 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 GUF1Q8N442 669 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 MAB21L3Q8N8X9 362 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 PCED1BQ96HM7 432 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 MRPL45Q9BRJ2 306 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 IER2Q9BTL4 223 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 KIF9Q9HAQ2 790 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 LMAN1LQ9HAT1 526 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 EHD2Q9NZN4 543 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 NDRG2Q9UN36 371 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 VPS13AQ96RL7 3174 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
PRKCSH-215ENST00000592435 ZFHX2Q9C0A1 2572 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms