RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 RWDD2AQ9UIY3 292 aa18.68■□□□□ 0.58
CIRBP-235ENST00000591935 R3HCC1Q9Y3T6 440 aaKnown RBP18.68■□□□□ 0.58
CIRBP-235ENST00000591935 COL4A2P08572 1712 aa18.68■□□□□ 0.58
CIRBP-235ENST00000591935 PTPRJQ12913 1337 aa18.68■□□□□ 0.58
CIRBP-235ENST00000591935 NRDCO43847 1150 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 ATF6P18850 670 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 CDK11BP21127 795 aaKnown RBP18.67■□□□□ 0.58
CIRBP-235ENST00000591935 SURF1Q15526 300 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 MGAT5BQ3V5L5 792 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 ARHGAP15Q53QZ3 475 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 LMBRD2Q68DH5 695 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-235ENST00000591935 GAREM2Q75VX8 874 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 CBWD2Q8IUF1 395 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 MFSD6LQ8IWD5 586 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 CSGALNACT2Q8N6G5 542 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 LRRC52Q8N7C0 313 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 RSPRY1Q96DX4 576 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 SEPT5Q99719 369 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-235ENST00000591935 LPIN3Q9BQK8 851 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 SIX4Q9UIU6 781 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 ITGA11Q9UKX5 1188 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 PATJQ8NI35 1801 aa18.67■□□□□ 0.58
CIRBP-235ENST00000591935 F5P12259 2224 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 FANCMQ8IYD8 2048 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 WDR87Q6ZQQ6 2873 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 ZNF263O14978 683 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 EIF3DO15371 548 aaKnown RBP eCLIP18.66■□□□□ 0.58
CIRBP-235ENST00000591935 TGFB1I1O43294 461 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 HUS1O60921 280 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 RHOBTB3O94955 611 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 ATP1A3P13637 1013 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 GDI1P31150 447 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 RBP5P82980 135 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 TSPY1Q01534 308 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 EHHADHQ08426 723 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 BFSP1Q12934 665 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 TAF12Q16514 161 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 NFE2Q16621 373 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-235ENST00000591935 COBLL1Q53SF7 1204 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 FAM26FQ5R3K3 315 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 YAF2Q8IY57 180 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 PDCL2Q8N4E4 241 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 OR5B17Q8NGF7 314 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 SPATA18Q8TC71 538 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 GIPC2Q8TF65 315 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 MED15Q96RN5 788 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 MTMR12Q9C0I1 747 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 ATXN3LQ9H3M9 355 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 KIAA1586Q9HCI6 787 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 KCND1Q9NSA2 647 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 ZMYM5Q9UJ78 669 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 PYCARDQ9ULZ3 195 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 L1RE1Q9UN81 338 aa18.66■□□□□ 0.58
CIRBP-235ENST00000591935 NUP210Q8TEM1 1887 aaPredicted RBP18.66■□□□□ 0.58
CIRBP-235ENST00000591935 ZNF638Q14966 1978 aaKnown RBP18.66■□□□□ 0.58
CIRBP-235ENST00000591935 ZNF233A6NK53 670 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 KLRC4O43908 158 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 KRT19P08727 400 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 TMEM191BP0C7N4 346 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 HAPLN1P10915 354 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-235ENST00000591935 CD44P16070 742 aaKnown RBP18.65■□□□□ 0.58
CIRBP-235ENST00000591935 TARSP26639 723 aaKnown RBP18.65■□□□□ 0.58
CIRBP-235ENST00000591935 GABRR2P28476 465 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 CDC25CP30307 473 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 RPS9P46781 194 aaKnown RBP18.65■□□□□ 0.58
CIRBP-235ENST00000591935 MLLT6P55198 1093 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-235ENST00000591935 STIM1Q13586 685 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 C1orf228Q6PIY5 440 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 UNC13DQ70J99 1090 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 TMC6Q7Z403 805 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 FILIP1Q7Z7B0 1213 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 OSTM1Q86WC4 334 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 VSTM4Q8IW00 320 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 TMEM86AQ8N2M4 240 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 CLDN23Q96B33 292 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 MSANTD3Q96H12 275 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 ANKRD36BP1Q96IX9 119 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 GCNAQ96QF7 691 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 IL21Q9HBE4 155 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 INTS13Q9NVM9 706 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 SPATA6Q9NWH7 488 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-235ENST00000591935 HSPBP1Q9NZL4 362 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 OBSL1O75147 1896 aa18.65■□□□□ 0.58
CIRBP-235ENST00000591935 PVALEFA0A1B0GWK0 134 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 HEPACAM2A8MVW5 462 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 CLIC2O15247 247 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 LAMTOR5O43504 91 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 HCRTO43612 131 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 SP9P0CG40 484 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 ACAT1P24752 427 aaKnown RBP18.64■□□□□ 0.57
CIRBP-235ENST00000591935 WEE1P30291 646 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 SNRPFP62306 86 aaKnown RBP18.64■□□□□ 0.57
CIRBP-235ENST00000591935 MYL7Q01449 175 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 MYO1EQ12965 1108 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 PAK1Q13153 545 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 FZD5Q13467 585 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 ZNF528Q3MIS6 628 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 CDKAL1Q5VV42 579 aa18.64■□□□□ 0.57
CIRBP-235ENST00000591935 NELFCDQ8IXH7 590 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms