RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ARHGAP40Q5TG30 622 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 MRGPRGQ86SM5 289 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 KRT78Q8N1N4 520 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 FAM109AQ8N4B1 249 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 TOR1AIP2Q8NFQ8 470 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 PJA1Q8NG27 643 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 OR56A3Q8NH54 315 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 TRIM43Q96BQ3 446 aaPredicted RBP4.23□□□□□ -1.73
VMP1-212ENST00000591782 FAM136AQ96C01 138 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 ACTRT3Q9BYD9 372 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 AMBRA1Q9C0C7 1298 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 BTBD1Q9H0C5 482 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 ARNT2Q9HBZ2 717 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 CORO2BQ9UQ03 480 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 SHOC2Q9UQ13 582 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 DMTF1Q9Y222 760 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 TBC1D30Q9Y2I9 924 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 SNX13Q9Y5W8 968 aa4.23□□□□□ -1.73
VMP1-212ENST00000591782 SALL3Q9BXA9 1300 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 F8W8V4 182 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 hCG_1984214I3L0E3 225 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PYCARD-AS1I3L0S3 204 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PEX1O43933 1283 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 RAMP2O60895 175 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 ESRRBO95718 433 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 RHOP08100 348 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 CHRM2P08172 466 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 XRCC6P12956 609 aaKnown RBP eCLIP4.22□□□□□ -1.738e-25■■■□□ 15.3
VMP1-212ENST00000591782 ADRA1BP35368 520 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PLA2G5P39877 138 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 MPLP40238 635 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PIK3CBP42338 1070 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 KRT17Q04695 432 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 ITIH3Q06033 890 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 DPTQ07507 201 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 ZIK1Q3SY52 487 aaPredicted RBP4.22□□□□□ -1.73
VMP1-212ENST00000591782 PLA1AQ53H76 456 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PCSK4Q6UW60 755 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 ZDHHC24Q6UX98 284 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 GAS2L3Q86XJ1 694 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 FTSJ3Q8IY81 847 aaKnown RBP4.22□□□□□ -1.73
VMP1-212ENST00000591782 GPATCH11Q8N954 259 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PHKBQ93100 1093 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 FBXL20Q96IG2 436 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PTDSS2Q9BVG9 487 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 STK31Q9BXU1 1019 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 TOR3AQ9H497 397 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 A1CFQ9NQ94 594 aaKnown RBP4.22□□□□□ -1.73
VMP1-212ENST00000591782 SERHLQ9NQF3 203 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 SERTAD3Q9UJW9 196 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 PACSIN3Q9UKS6 424 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 MRPS17Q9Y2R5 130 aaKnown RBP4.22□□□□□ -1.73
VMP1-212ENST00000591782 PAXBP1Q9Y5B6 917 aa4.22□□□□□ -1.73
VMP1-212ENST00000591782 MBD3L4A6NDZ8 208 aaPredicted RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 MBD3L3A6NE82 208 aaPredicted RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 RHPN2P1A8MT19 583 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 VWC2LB2RUY7 222 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 CLGNO14967 610 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 KPNA5O15131 536 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 PPM1DO15297 605 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 GCP02774 474 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 MYL1P05976 194 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 PDHA1P08559 390 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 MYL3P08590 195 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 PHKG2P15735 406 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 RPL17P18621 184 aaKnown RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 PROZP22891 400 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 KLRC1P26715 233 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 FOLR3P41439 243 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 INHBCP55103 352 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 NXPH1P58417 271 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 MYO1EQ12965 1108 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 HSP90AB4PQ58FF6 505 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 ICE2Q659A1 982 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 KIAA0895LQ68EN5 471 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 SFRP4Q6FHJ7 346 aaPredicted RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 CCSAPQ6IQ19 270 aaPredicted RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 RGS7BPQ6MZT1 257 aaPredicted RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 NOL8Q76FK4 1167 aaKnown RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 TFAP2BQ92481 460 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 ZNF622Q969S3 477 aaKnown RBP eCLIP4.21□□□□□ -1.74
VMP1-212ENST00000591782 SPSB4Q96A44 273 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 PGBD1Q96JS3 809 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 MSLNLQ96KJ4 702 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 SORCS2Q96PQ0 1159 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 NELL2Q99435 816 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 NAA15Q9BXJ9 866 aaKnown RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 IKZF4Q9H2S9 585 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 CXorf36Q9H7Y0 433 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
VMP1-212ENST00000591782 SSX2IPQ9Y2D8 614 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 FER1L4A9Z1Z3 1794 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 ADGRA2Q96PE1 1338 aa4.21□□□□□ -1.74
VMP1-212ENST00000591782 A0A087X1B8 175 aa4.2□□□□□ -1.74
VMP1-212ENST00000591782 WDR27A2RRH5 827 aa4.2□□□□□ -1.74
VMP1-212ENST00000591782 ADM5C9JUS6 153 aa4.2□□□□□ -1.74
VMP1-212ENST00000591782 MPPED1O15442 326 aa4.2□□□□□ -1.74
VMP1-212ENST00000591782 RASSF9O75901 435 aa4.2□□□□□ -1.74
VMP1-212ENST00000591782 NBPF7P0C2Y1 421 aaPredicted RBP4.2□□□□□ -1.74
VMP1-212ENST00000591782 IL1R1P14778 569 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms