RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CEP250Q9BV73 2442 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 GABRDO14764 452 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 KIAA0391O15091 583 aaKnown RBP23.35■■□□□ 1.33
DDX39A-215ENST00000590696 HCRTO43612 131 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 NOL4O94818 638 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 RETP07949 1114 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 HOXC13P31276 330 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 SOWAHAQ2M3V2 549 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 STXBP4Q6ZWJ1 553 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 SPATA2LQ8IUW3 424 aaPredicted RBP23.35■■□□□ 1.33
DDX39A-215ENST00000590696 LINC00301Q8NCQ3 95 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 SPATA18Q8TC71 538 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 HPS3Q969F9 1004 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 INTS13Q9NVM9 706 aa23.35■■□□□ 1.33
DDX39A-215ENST00000590696 R3HCC1Q9Y3T6 440 aaKnown RBP23.35■■□□□ 1.33
DDX39A-215ENST00000590696 OBSL1O75147 1896 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 OTOL1A6NHN0 477 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-215ENST00000590696 ZNF233A6NK53 670 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 TADA3O75528 432 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 PCSK1P29120 753 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 MYO1EQ12965 1108 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 CFAP221Q4G0U5 840 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 CC2D1AQ6P1N0 951 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-215ENST00000590696 OR5B17Q8NGF7 314 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 RIN3Q8TB24 985 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 TRMT2BQ96GJ1 504 aaKnown RBP23.34■■□□□ 1.33
DDX39A-215ENST00000590696 LRRC27Q9C0I9 530 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 TNMDQ9H2S6 317 aa23.34■■□□□ 1.33
DDX39A-215ENST00000590696 CDV3Q9UKY7 258 aaKnown RBP23.34■■□□□ 1.33
DDX39A-215ENST00000590696 ZNF638Q14966 1978 aaKnown RBP23.34■■□□□ 1.33
DDX39A-215ENST00000590696 PTPRJQ12913 1337 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 ARSAP15289 507 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 GRSF1Q12849 480 aaKnown RBP eCLIP23.33■■□□□ 1.33
DDX39A-215ENST00000590696 ZNF268Q14587 947 aaPredicted RBP23.33■■□□□ 1.33
DDX39A-215ENST00000590696 SURF1Q15526 300 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 TMEM196Q5HYL7 178 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 FSTL4Q6MZW2 842 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 PKN3Q6P5Z2 889 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 DPH6Q7L8W6 267 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 CBWD2Q8IUF1 395 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 SCN4BQ8IWT1 228 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 CHFRQ96EP1 664 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 FUBP3Q96I24 572 aaKnown RBP eCLIP23.33■■□□□ 1.33
DDX39A-215ENST00000590696 HPDLQ96IR7 371 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 MYRFLQ96LU7 910 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 TRPC7Q9HCX4 862 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 KBTBD4Q9NVX7 518 aa23.33■■□□□ 1.33
DDX39A-215ENST00000590696 TFIP11Q9UBB9 837 aaKnown RBP23.33■■□□□ 1.33
DDX39A-215ENST00000590696 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.33■■□□□ 1.33
DDX39A-215ENST00000590696 K7ELQ4 463 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-215ENST00000590696 TRDMT1O14717 391 aaKnown RBP23.32■■□□□ 1.32
DDX39A-215ENST00000590696 SPTLC2O15270 562 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 ATP2C2O75185 946 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 TNNC2P02585 160 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 HOXA6P31267 233 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 E2F4Q16254 413 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 DUOXA2Q1HG44 320 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 FAM171BQ6P995 826 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-215ENST00000590696 WDR5BQ86VZ2 330 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 CYP2S1Q96SQ9 504 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 TRIM9Q9C026 710 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 HSPBP1Q9NZL4 362 aa23.32■■□□□ 1.32
DDX39A-215ENST00000590696 LRP3O75074 770 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 PPP6R2O75170 966 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 LMO2P25791 158 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 HOXD13P35453 343 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 AMPD2Q01433 879 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 FAM160A1Q05DH4 1040 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 PDGFRLQ15198 375 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 CEP68Q76N32 757 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 LIMS2Q7Z4I7 341 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 TTC16Q8NEE8 873 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 KBTBD7Q8WVZ9 684 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 SLC22A12Q96S37 553 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 RTKNQ9BST9 563 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 CUEDC2Q9H467 287 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 SEMA4GQ9NTN9 838 aa23.31■■□□□ 1.32
DDX39A-215ENST00000590696 MAGEC2Q9UBF1 373 aaPredicted RBP23.31■■□□□ 1.32
DDX39A-215ENST00000590696 USP17L7P0C7H9 530 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 MAGEA11P43364 429 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 GALK1P51570 392 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 PSMC1P62191 440 aaKnown RBP23.3■■□□□ 1.32
DDX39A-215ENST00000590696 ASIC1P78348 528 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 AMPD3Q01432 767 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 MTF1Q14872 753 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 C4orf50Q6ZRC1 276 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 ZNF507Q8TCN5 953 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 DHX58Q96C10 678 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 ZNF396Q96N95 335 aaPredicted RBP23.3■■□□□ 1.32
DDX39A-215ENST00000590696 SYT15Q9BQS2 421 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 KIAA1586Q9HCI6 787 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 FBRSL1Q9HCM7 1045 aaKnown RBP23.3■■□□□ 1.32
DDX39A-215ENST00000590696 CDH9Q9ULB4 789 aa23.3■■□□□ 1.32
DDX39A-215ENST00000590696 TRAV19A0A0A6YYK7 116 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 DCDC2BA2VCK2 349 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 EIF3DO15371 548 aaKnown RBP eCLIP23.29■■□□□ 1.32
DDX39A-215ENST00000590696 ATG13O75143 517 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 EGFP01133 1207 aa23.29■■□□□ 1.32
DDX39A-215ENST00000590696 CKMP06732 381 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms