RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 HMGA1P17096 107 aaKnown RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 PFKLP17858 780 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 WARSP23381 471 aaKnown RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 CCNE1P24864 410 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 ATICP31939 592 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 HOXD13P35453 343 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 PDE6CP51160 858 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 AP3M2P53677 418 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 NLRP12P59046 1061 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 AMPD2Q01433 879 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 CYP24A1Q07973 514 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 MTAPQ13126 283 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 PSMD2Q13200 908 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 ZNF268Q14587 947 aaPredicted RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 SOWAHAQ2M3V2 549 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 ITPRIPL2Q3MIP1 535 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 STXBP5Q5T5C0 1151 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 FAM171BQ6P995 826 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 TRAPPC11Q7Z392 1133 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 SPEM1Q8N4L4 309 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 GPR161Q8N6U8 529 aaKnown RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 FSIP1Q8NA03 581 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 GLIS3Q8NEA6 775 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 ZSWIM2Q8NEG5 633 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 GIPC2Q8TF65 315 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 SCFD1Q8WVM8 642 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 SECISBP2LQ93073 1101 aaKnown RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 HPS3Q969F9 1004 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 RSPRY1Q96DX4 576 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 SPATA17Q96L03 361 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 CGRRF1Q99675 332 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 PI4K2AQ9BTU6 479 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 SLC46A2Q9BY10 475 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 LMAN1LQ9HAT1 526 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 TDP1Q9NUW8 608 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 TMLHEQ9NVH6 421 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 GTF3C4Q9UKN8 822 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 NDRG2Q9UN36 371 aaKnown RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 PCDHA7Q9UN72 937 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 ATP6V1DQ9Y5K8 247 aa8.14□□□□□ -1.11
NPC1-208ENST00000590301 RIF1Q5UIP0 2472 aaKnown RBP8.14□□□□□ -1.11
NPC1-208ENST00000590301 C2orf16Q68DN1 1984 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 NCANO14594 1321 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 PTPRJQ12913 1337 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 SLC38A8A6NNN8 435 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 SPECC1L-ADORA2AF8WAN1 911 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 EXOC3O60645 756 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 LILRB5O75023 590 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 KIF20AO95235 890 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 DLATP10515 647 aaKnown RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 CHRNB1P11230 501 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 TNNI1P19237 187 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 CMA1P23946 247 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 CYP2F1P24903 491 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 HOXA6P31267 233 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 CTHP32929 405 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 CXCL12P48061 93 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 PPP3CCP48454 512 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 CYP2J2P51589 502 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 TNNC1P63316 161 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 CYP4F8P98187 520 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 DNM1Q05193 864 aaKnown RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 TRPC3Q13507 836 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 PDGFRLQ15198 375 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 KNOP1Q1ED39 458 aaKnown RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 TMEM150AQ86TG1 271 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 SLC9A9Q8IVB4 645 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 KIAA1958Q8N8K9 716 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 SUMF1Q8NBK3 374 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 OR5B17Q8NGF7 314 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 KBTBD7Q8WVZ9 684 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 FOXD4L4Q8WXT5 416 aaPredicted RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 SYAP1Q96A49 352 aaPredicted RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 MMS19Q96T76 1030 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 SYT15Q9BQS2 421 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 EPC1Q9H2F5 836 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 SNX25Q9H3E2 840 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 VRTNQ9H8Y1 702 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 EXOC1Q9NV70 894 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 MAGEC2Q9UBF1 373 aaPredicted RBP8.13□□□□□ -1.11
NPC1-208ENST00000590301 MYO15AQ9UKN7 3530 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 VWA8A3KMH1 1905 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 DMDP11532 3685 aa8.13□□□□□ -1.11
NPC1-208ENST00000590301 TRAV19A0A0A6YYK7 116 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 USP17L7P0C7H9 530 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 TDGF1P13385 188 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 TCF3P15923 654 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 SDHBP21912 280 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 ACAT1P24752 427 aaKnown RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 ANXA13P27216 316 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 CNR2P34972 360 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 GNL1P36915 607 aaPredicted RBP8.12□□□□□ -1.11
NPC1-208ENST00000590301 AFMP43652 599 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 CLDN10P78369 228 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 KRT85P78386 507 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 CUL4BQ13620 913 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 DDR2Q16832 855 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 WDR72Q3MJ13 1102 aa8.12□□□□□ -1.11
NPC1-208ENST00000590301 FOXD4L6Q3SYB3 417 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms