RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ANP32BQ92688 251 aaKnown RBP14.47□□□□□ -0.09
VMP1-210ENST00000589823 CYFIP2Q96F07 1278 aa14.47□□□□□ -0.09
VMP1-210ENST00000589823 PCED1BQ96HM7 432 aa14.47□□□□□ -0.09
VMP1-210ENST00000589823 FUBP3Q96I24 572 aaKnown RBP eCLIP14.47□□□□□ -0.09
VMP1-210ENST00000589823 CYP4F11Q9HBI6 524 aa14.47□□□□□ -0.09
VMP1-210ENST00000589823 MTMR10Q9NXD2 777 aa14.47□□□□□ -0.09
VMP1-210ENST00000589823 PRRG1O14668 218 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 NCK2O43639 380 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 SPATA31D3P0C874 917 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 CCDC130P13994 396 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 BRD2P25440 801 aaKnown RBP14.46□□□□□ -0.09
VMP1-210ENST00000589823 ADORA2BP29275 332 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 CASP14P31944 242 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 CLCN1P35523 988 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 KRT9P35527 623 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 TUFMP49411 452 aaKnown RBP14.46□□□□□ -0.09
VMP1-210ENST00000589823 CDR1P51861 262 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 ARID5AQ03989 594 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 HYAL1Q12794 435 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 DUSP4Q13115 394 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 ASIC2Q16515 512 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 CCDC142Q17RM4 750 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 MGAT5BQ3V5L5 792 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 CFAP221Q4G0U5 840 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 PPP1R26Q5T8A7 1209 aaPredicted RBP14.46□□□□□ -0.09
VMP1-210ENST00000589823 LIN9Q5TKA1 542 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 SFMBT2Q5VUG0 894 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 ARHGAP17Q68EM7 881 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 LLGL2Q6P1M3 1020 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 SPATA31D4Q6ZUB0 917 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 CCDC149Q6ZUS6 474 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 FAM35AQ86V20 835 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 ATAD1Q8NBU5 361 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 KREMEN2Q8NCW0 462 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 SLC2A14Q8TDB8 520 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 SLC22A17Q8WUG5 538 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 HDAC7Q8WUI4 952 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 HNRNPABQ99729 332 aaKnown RBP14.46□□□□□ -0.09
VMP1-210ENST00000589823 B3GNT5Q9BYG0 378 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 PLEKHA4Q9H4M7 779 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 ABCB6Q9NP58 842 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 HSFX1Q9UBD0 423 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 HESX1Q9UBX0 185 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 FBXW11Q9UKB1 542 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 HCFC2Q9Y5Z7 792 aa14.46□□□□□ -0.09
VMP1-210ENST00000589823 GOLGA6L6A8MZA4 724 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 CLDN5O00501 218 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 EPCAMP16422 314 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 BDNFP23560 247 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 SLC8A3P57103 927 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 MYO9BQ13459 2157 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 CNGA2Q16280 664 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 TSR1Q2NL82 804 aaKnown RBP14.45□□□□□ -0.1
VMP1-210ENST00000589823 VSTM1Q6UX27 236 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 SLC47A2Q86VL8 602 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 CNGA4Q8IV77 575 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 TCEAL8Q8IYN2 117 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 FUKQ8N0W3 1084 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 EFHBQ8N7U6 833 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 CASP10Q92851 521 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 SMARCD1Q96GM5 515 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
VMP1-210ENST00000589823 ZNF518BQ9C0D4 1074 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 MAN1C1Q9NR34 630 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 SLC27A5Q9Y2P5 690 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 ATG2AQ2TAZ0 1938 aa14.45□□□□□ -0.1
VMP1-210ENST00000589823 AKR1B15C9JRZ8 316 aaPredicted RBP14.44□□□□□ -0.1
VMP1-210ENST00000589823 O00370 1275 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 MFAP3LO75121 409 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 AP1G2O75843 785 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 SEC24AO95486 1093 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 VNN2O95498 520 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 CALCAP01258 141 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 C8AP07357 584 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 FAM200BP0CF97 657 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 HAPLN1P10915 354 aaPredicted RBP14.44□□□□□ -0.1
VMP1-210ENST00000589823 CYP11B1P15538 503 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 CYP2F1P24903 491 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 GTF2F1P35269 517 aaKnown RBP eCLIP14.44□□□□□ -0.1
VMP1-210ENST00000589823 MAGEA11P43364 429 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 RPL10AP62906 217 aaKnown RBP14.44□□□□□ -0.1
VMP1-210ENST00000589823 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
VMP1-210ENST00000589823 GOLGA7BQ2TAP0 167 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 PPM1LQ5SGD2 360 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 LCLAT1Q6UWP7 414 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 RTL10Q7L3V2 364 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 GPIHBP1Q8IV16 184 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 SCN4BQ8IWT1 228 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 OR8K1Q8NGG5 319 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 SLC7A14Q8TBB6 771 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 EPS8L1Q8TE68 723 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 ZNF606Q8WXB4 792 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 TFAP2BQ92481 460 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 SYN2Q92777 582 aaPredicted RBP14.44□□□□□ -0.1
VMP1-210ENST00000589823 ACP6Q9NPH0 428 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
VMP1-210ENST00000589823 DZANK1Q9NVP4 752 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms