RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 FNIP1Q8TF40 1166 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 SCLT1Q96NL6 688 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 FDXACB1Q9BRP7 624 aaPredicted RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 OSBPL8Q9BZF1 889 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 TRIM7Q9C029 511 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 UPF3AQ9H1J1 476 aaKnown RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 PABPC3Q9H361 631 aaKnown RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 DDX56Q9NY93 547 aaKnown RBP10.52□□□□□ -0.73
VPS25-202ENST00000589219 SIX4Q9UIU6 781 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 DERAQ9Y315 318 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 SNX24Q9Y343 169 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 RALGAPA2Q2PPJ7 1873 aa10.52□□□□□ -0.73
VPS25-202ENST00000589219 TCRBV7S2A1N4TA0A589 114 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 LACTBL1A8MY62 500 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 H3BRB1 525 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 EIF3HO15372 352 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS25-202ENST00000589219 TSPAN1O60635 241 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 KRT1P04264 644 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 KRT19P08727 400 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 ATF2P15336 505 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 ARF4P18085 180 aaPredicted RBP10.51□□□□□ -0.73
VPS25-202ENST00000589219 GRM5P41594 1212 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 PLTPP55058 493 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 TAS2R40P59535 323 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 OSTNP61366 133 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 GNGT1P63211 74 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 LMNB2Q03252 620 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 KRT17Q04695 432 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 FPGSQ05932 587 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 IFFO1Q0D2I5 559 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 FAAP100Q0VG06 881 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 STILQ15468 1287 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 CCNG2Q16589 344 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 PPP1R15BQ5SWA1 713 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 C9orf50Q5SZB4 431 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 JADE1Q6IE81 842 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 DCUN1D2Q6PH85 259 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 POLNQ7Z5Q5 900 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 RCOR2Q8IZ40 523 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 FBXO25Q8TCJ0 367 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 ART4Q93070 314 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 SNF8Q96H20 258 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 MCEEQ96PE7 176 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 MIS12Q9H081 205 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 TUT1Q9H6E5 874 aaKnown RBP10.51□□□□□ -0.73
VPS25-202ENST00000589219 POLIQ9UNA4 740 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 ATP8A1Q9Y2Q0 1164 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 A0A0C4DFX4 3053 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 ANK1P16157 1881 aa10.51□□□□□ -0.73
VPS25-202ENST00000589219 ARVCFO00192 962 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 DLL1O00548 723 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 CILPO75339 1184 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 CABYRO75952 493 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 TIMP1P01033 207 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 VTNP04004 478 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 ITGB3P05106 788 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 WEE2P0C1S8 567 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 RALAP11233 206 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 RARGP13631 454 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 CD19P15391 556 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 SMPD1P17405 629 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 ITIH2P19823 946 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 FLT3P36888 993 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 CDK7P50613 346 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 NKX3-2P78367 333 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 RBP5P82980 135 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 PTPN11Q06124 597 aaPredicted RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 ADCY2Q08462 1091 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 INCA1Q0VD86 236 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 KRT71Q3SY84 523 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 ODF2Q5BJF6 829 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 DRICH1Q6PGQ1 229 aaPredicted RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 LRRC31Q6UY01 552 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 TRMT10CQ7L0Y3 403 aaKnown RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 SH2D3CQ8N5H7 860 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 CCDC89Q8N998 374 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 ATL2Q8NHH9 583 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 IPO4Q8TEX9 1081 aaKnown RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 ZBTB9Q96C00 473 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 ZNF668Q96K58 619 aaPredicted RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 ACAP3Q96P50 834 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 TMEM109Q9BVC6 243 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 SEZ6LQ9BYH1 1024 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 FRMD8P1Q9BZ68 369 aaPredicted RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 FOXP3Q9BZS1 431 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 AP5M1Q9H0R1 490 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 STMN4Q9H169 189 aaPredicted RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 PLEKHA5Q9HAU0 1116 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 NXF1Q9UBU9 619 aaKnown RBP10.5□□□□□ -0.73
VPS25-202ENST00000589219 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 KIAA1257Q9ULG3 409 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 USTQ9Y2C2 406 aa10.5□□□□□ -0.73
VPS25-202ENST00000589219 TMEM265A0A087WTH1 108 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 A0A1B0GUA9 196 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 MYADML2A6NDP7 307 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms