RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 FAM186BQ8IYM0 893 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 MYCBPAPQ8TBZ2 947 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 TAF4BQ92750 862 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 DNASE1L2Q92874 299 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 IRF7Q92985 503 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 BRD9Q9H8M2 597 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 CRTAC1Q9NQ79 661 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 UXTQ9UBK9 157 aaPredicted RBP20.54■□□□□ 0.88
CIRBP-221ENST00000589161 SIT1Q9Y3P8 196 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 PCDHA5Q9Y5H7 936 aa20.54■□□□□ 0.88
CIRBP-221ENST00000589161 MUC6Q6W4X9 2439 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 HEPACAM2A8MVW5 462 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 DPYSL4O14531 572 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 VNN1O95497 513 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 P4HA1P13674 534 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 ZCWPW2Q504Y3 356 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 COBLL1Q53SF7 1204 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 STXBP5Q5T5C0 1151 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 SV2AQ7L0J3 742 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 SCN4BQ8IWT1 228 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 SMYD4Q8IYR2 804 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-221ENST00000589161 SPATA20Q8TB22 786 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 MYLPFQ96A32 169 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 CEP295NLQ96MC4 621 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 MKNK1Q9BUB5 465 aa20.53■□□□□ 0.88
CIRBP-221ENST00000589161 MAGED2Q9UNF1 606 aaPredicted RBP20.53■□□□□ 0.88
CIRBP-221ENST00000589161 KMT2EQ8IZD2 1858 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 KANSL1LA0AUZ9 987 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 SOBPA7XYQ1 873 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 A8MXQ7 604 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 ZNF263O14978 683 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 KINO60870 393 aaKnown RBP20.52■□□□□ 0.88
CIRBP-221ENST00000589161 NOL4O94818 638 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 F11P03951 625 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 PTPN1P18031 435 aaKnown RBP20.52■□□□□ 0.88
CIRBP-221ENST00000589161 DDX6P26196 483 aaKnown RBP eCLIP20.52■□□□□ 0.88
CIRBP-221ENST00000589161 GDI1P31150 447 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 PRCPP42785 496 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 NLRP12P59046 1061 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 CYP27A1Q02318 531 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 CCDC142Q17RM4 750 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 SDHAF4Q5VUM1 108 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 YAF2Q8IY57 180 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 CCDC105Q8IYK2 499 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 TRMT2BQ96GJ1 504 aaKnown RBP20.52■□□□□ 0.88
CIRBP-221ENST00000589161 PCED1BQ96HM7 432 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 DDX23Q9BUQ8 820 aaKnown RBP20.52■□□□□ 0.88
CIRBP-221ENST00000589161 TRPV5Q9NQA5 729 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 OBP2AQ9NY56 170 aa20.52■□□□□ 0.88
CIRBP-221ENST00000589161 SLC38A8A6NNN8 435 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 CETN3O15182 167 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 BDNFP23560 247 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 GRIK1P39086 918 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 CYP4F8P98187 520 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 MDH1BQ5I0G3 518 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 C1orf220Q5T0J3 134 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 DTWD2Q8NBA8 298 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 MRPS31Q92665 395 aaKnown RBP20.51■□□□□ 0.87
CIRBP-221ENST00000589161 SPATA17Q96L03 361 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 MYRFLQ96LU7 910 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 NELL2Q99435 816 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 TSG101Q99816 390 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 SLC46A2Q9BY10 475 aa20.51■□□□□ 0.87
CIRBP-221ENST00000589161 TRIM66O15016 1216 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 ANXA13P27216 316 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 PIK3CAP42336 1068 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 CDH8P55286 799 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 MCCD1P59942 119 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-221ENST00000589161 ZNF852Q6ZMS4 543 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 TMEM150AQ86TG1 271 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 CMTM8Q8IZV2 173 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 B3GALNT2Q8NCR0 500 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 PJA1Q8NG27 643 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 TNIP3Q96KP6 325 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 OSBPL6Q9BZF3 934 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 IMPG2Q9BZV3 1241 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 SMYD3Q9H7B4 428 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 HEBP1Q9NRV9 189 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 EHD2Q9NZN4 543 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 MRPS17Q9Y2R5 130 aaKnown RBP20.5■□□□□ 0.87
CIRBP-221ENST00000589161 NME7Q9Y5B8 376 aa20.5■□□□□ 0.87
CIRBP-221ENST00000589161 CHADO15335 359 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 ASS1P00966 412 aaKnown RBP20.49■□□□□ 0.87
CIRBP-221ENST00000589161 HLA-DRAP01903 254 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 EPB41P11171 864 aaKnown RBP20.49■□□□□ 0.87
CIRBP-221ENST00000589161 GTF2H1P32780 548 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 AVPR1AP37288 418 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 GCLMP48507 274 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 FCHO2Q0JRZ9 810 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 STIM1Q13586 685 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 TPRG1Q6ZUI0 275 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 GPIHBP1Q8IV16 184 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 ATOH1Q92858 354 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-221ENST00000589161 ERCC4Q92889 916 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-221ENST00000589161 RSPRY1Q96DX4 576 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 FOXQ1Q9C009 403 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 DPEP3Q9H4B8 488 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 CHMP5Q9NZZ3 219 aa20.49■□□□□ 0.87
CIRBP-221ENST00000589161 FAM170BA6NMN3 283 aa20.48■□□□□ 0.87
CIRBP-221ENST00000589161 H0Y858 1186 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms