RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 C12orf60Q5U649 245 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 CD276Q5ZPR3 534 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 NPNTQ6UXI9 565 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 MYLIPQ8WY64 445 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 FATE1Q969F0 183 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 AMNQ9BXJ7 453 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 TTYH1Q9H313 450 aaPredicted RBP8.79□□□□□ -1
ATG4D-210ENST00000588972 DIAPH3Q9NSV4 1193 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 C19orf73Q9NVV2 129 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 DTLQ9NZJ0 730 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 FNIP2Q9P278 1114 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 ARHGAP28Q9P2N2 729 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 ARPP21Q9UBL0 812 aaPredicted RBP8.79□□□□□ -1
ATG4D-210ENST00000588972 GPR160Q9UJ42 338 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 GREB1LQ9C091 1923 aaPredicted RBP8.79□□□□□ -1
ATG4D-210ENST00000588972 CCDC171Q6TFL3 1326 aa8.79□□□□□ -1
ATG4D-210ENST00000588972 ROBO3Q96MS0 1386 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 A0A0G2JMZ2 1700 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 DYRK3O43781 588 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 GH2P01242 217 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 CYBAP13498 195 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 HTR1BP28222 390 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 TRHRP34981 398 aaPredicted RBP8.78□□□□□ -1
ATG4D-210ENST00000588972 TRIM60Q495X7 471 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 CERKLQ49MI3 558 aaPredicted RBP8.78□□□□□ -1
ATG4D-210ENST00000588972 TATDN1Q6P1N9 297 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 DARS2Q6PI48 645 aaKnown RBP8.78□□□□□ -1
ATG4D-210ENST00000588972 C1orf228Q6PIY5 440 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 RIN2Q8WYP3 895 aaPredicted RBP8.78□□□□□ -1
ATG4D-210ENST00000588972 BADQ92934 168 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 CGRRF1Q99675 332 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 NAPBQ9H115 298 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 MTG2Q9H4K7 406 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 HSPBP1Q9NZL4 362 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 USP18Q9UMW8 372 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 POLHQ9Y253 713 aa8.78□□□□□ -1
ATG4D-210ENST00000588972 MPHOSPH10O00566 681 aaKnown RBP8.77□□□□□ -1.01
ATG4D-210ENST00000588972 PRDM1O75626 825 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 LRG1P02750 347 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 PRNPP04156 253 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 HSPD1P10809 573 aaKnown RBP8.77□□□□□ -1.01
ATG4D-210ENST00000588972 AKR1B1P15121 316 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 CHMLP26374 656 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 GUCY1A2P33402 732 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 AGFG1P52594 562 aaKnown RBP8.77□□□□□ -1.01
ATG4D-210ENST00000588972 RAB3GAP1Q15042 981 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 SBK1Q52WX2 424 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 GJC2Q5T442 439 aaPredicted RBP8.77□□□□□ -1.01
ATG4D-210ENST00000588972 OLFML2BQ68BL8 750 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 LRSAM1Q6UWE0 723 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 SLC39A5Q6ZMH5 540 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 LILRA2Q8N149 483 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 TRPV1Q8NER1 839 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 NACAP1Q9BZK3 213 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 PITHD1Q9GZP4 211 aaPredicted RBP8.77□□□□□ -1.01
ATG4D-210ENST00000588972 UBA5Q9GZZ9 404 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 KIAA1683Q9H0B3 1180 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 RSAD1Q9HA92 442 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 SLC39A2Q9NP94 309 aa8.77□□□□□ -1.01
ATG4D-210ENST00000588972 EVLQ9UI08 416 aaPredicted RBP8.77□□□□□ -1.01
ATG4D-210ENST00000588972 MYH4Q9Y623 1939 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 ABHD14A-ACY1A0A1B0GW23 586 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 HIP1O00291 1037 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SEPT4O43236 478 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 OPHN1O60890 802 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 FGAP02671 866 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SETSIPP0DME0 302 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 ADORA2AP29274 412 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 STK3Q13188 491 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SLC9A5Q14940 896 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SEPT2Q15019 361 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 ANO6Q4KMQ2 910 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 RNF220Q5VTB9 566 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SWSAP1Q6NVH7 229 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SLC23A3Q6PIS1 610 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 CATSPERGQ6ZRH7 1159 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 DPP9Q86TI2 863 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 PROSER1Q86XN7 944 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 TICAM2Q86XR7 235 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 FAM126BQ8IXS8 530 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 CALML6Q8TD86 181 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 GAB3Q8WWW8 586 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 PPM1EQ8WY54 764 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 TSPAN17Q96FV3 270 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 TOE1Q96GM8 510 aaKnown RBP8.76□□□□□ -1.01
ATG4D-210ENST00000588972 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 INCENPQ9NQS7 918 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SWAP70Q9UH65 585 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 SCOCQ9UIL1 159 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 DBR1Q9UK59 544 aaKnown RBP8.76□□□□□ -1.01
ATG4D-210ENST00000588972 PCDHB6Q9Y5E3 794 aa8.76□□□□□ -1.01
ATG4D-210ENST00000588972 CHD9Q3L8U1 2897 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 TRIM43BA6NCK2 446 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 CAPN8A6NHC0 703 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 ZNF839A8K0R7 811 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 PEX2P28328 305 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 GSK3AP49840 483 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 ERVFRD-1P60508 538 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 HAND2P61296 217 aa8.75□□□□□ -1.01
ATG4D-210ENST00000588972 RAPGEF1Q13905 1077 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms