RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 CHFRQ96EP1 664 aa16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 MYRFLQ96LU7 910 aa16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 LRRC27Q9C0I9 530 aa16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 HPS4Q9NQG7 708 aa16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 THG1LQ9NWX6 298 aaKnown RBP16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 HSPBP1Q9NZL4 362 aa16.67■□□□□ 0.26
TRAPPC6A-204ENST00000588062 GREB1Q4ZG55 1949 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 OTOL1A6NHN0 477 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 EIF3DO15371 548 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 CUTAO60888 179 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 DDX6P26196 483 aaKnown RBP eCLIP16.66■□□□□ 0.265e-9■■■■□ 19.9
TRAPPC6A-204ENST00000588062 HOXC13P31276 330 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 AVPR1AP37288 418 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 RPL10AP62906 217 aaKnown RBP16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 EHHADHQ08426 723 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 DMWDQ09019 674 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 PUM1Q14671 1186 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 STXBP4Q6ZWJ1 553 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 DPH6Q7L8W6 267 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 KBTBD7Q8WVZ9 684 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 SNX21Q969T3 373 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 DHX58Q96C10 678 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 TRMT2BQ96GJ1 504 aaKnown RBP16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 HPDLQ96IR7 371 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 ANKRD36BP1Q96IX9 119 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 C7orf25Q9BPX7 421 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 TDP1Q9NUW8 608 aa16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 MAGED2Q9UNF1 606 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC6A-204ENST00000588062 HRO43593 1189 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 ATP2C2O75185 946 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 LMO2P25791 158 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 PCSK1P29120 753 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 ASIC1P78348 528 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 AMPD3Q01432 767 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 RUNX3Q13761 415 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 SURF1Q15526 300 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 DUOXA2Q1HG44 320 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 FAM26FQ5R3K3 315 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 TRIM68Q6AZZ1 485 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 SYNPOQ8N3V7 929 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 GPR161Q8N6U8 529 aaKnown RBP16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 IQUBQ8NA54 791 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 MRPS31Q92665 395 aaKnown RBP16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 FUBP3Q96I24 572 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 EBF3Q9H4W6 596 aa16.65■□□□□ 0.26
TRAPPC6A-204ENST00000588062 PTPRDP23468 1912 aa16.64■□□□□ 0.26
TRAPPC6A-204ENST00000588062 TPRP12270 2363 aaKnown RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CHURC1-FNTBB4DL54 471 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 TNNC2P02585 160 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CASP1P29466 404 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 MAGEA11P43364 429 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 FNTBP49356 437 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 MYO1EQ12965 1108 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 ZNF268Q14587 947 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 RSPO4Q2I0M5 234 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SPATA2LQ8IUW3 424 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 WDR49Q8IV35 697 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SCFD1Q8WVM8 642 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SLC22A12Q96S37 553 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CYP2S1Q96SQ9 504 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SYT15Q9BQS2 421 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 KIF9Q9HAQ2 790 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 KIAA1586Q9HCI6 787 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 PARD6AQ9NPB6 346 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CRTAC1Q9NQ79 661 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 AGPAT3Q9NRZ7 376 aa16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 UXTQ9UBK9 157 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6A-204ENST00000588062 TRDMT1O14717 391 aaKnown RBP16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 ARSAP15289 507 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 HOXA6P31267 233 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SNRNP35Q16560 246 aaKnown RBP16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 LPAL2Q16609 132 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 TMEM196Q5HYL7 178 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 LAIR1Q6GTX8 287 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 FSTL4Q6MZW2 842 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 PKN3Q6P5Z2 889 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 UNC13DQ70J99 1090 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 TRAPPC11Q7Z392 1133 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 DGLUCYQ7Z3D6 616 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 RDH13Q8NBN7 331 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CDH9Q9ULB4 789 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SPAG17Q6Q759 2223 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 RALGAPA1Q6GYQ0 2036 aa16.63■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CNOT1A5YKK6 2376 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 MED19A0JLT2 244 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 CLIC2O15247 247 aa16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 POLR2DO15514 142 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 WARSP23381 471 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 PSMC1P62191 440 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 FAM160A1Q05DH4 1040 aa16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 SRSF5Q13243 272 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6A-204ENST00000588062 PSMD6Q15008 389 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms