RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 COL28A1Q2UY09 1125 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 PIP4P1Q86T03 277 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 MON1AQ86VX9 555 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 HDDC3Q8N4P3 179 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 CCDC26Q8TAB7 109 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 SPPL2BQ8TCT7 592 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 USP33Q8TEY7 942 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 FAM212AQ96EL1 285 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 SPACA7Q96KW9 195 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 ZCWPW1Q9H0M4 648 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 TMEM74BQ9NUR3 256 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 LRWD1Q9UFC0 647 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 KIF3AQ9Y496 699 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 ADAMTS20P59510 1910 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 ZNF638Q14966 1978 aaKnown RBP9.24□□□□□ -0.93
SDF2-204ENST00000587338 TSC2P49815 1807 aa9.24□□□□□ -0.93
SDF2-204ENST00000587338 ASXL3Q9C0F0 2248 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 ANTXRLA6NF34 631 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 EIF4E1BA6NMX2 242 aaKnown RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 TNFRSF10BO14763 440 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 ALDH1A2O94788 518 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 CKMP06732 381 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 HMGA1P17096 107 aaKnown RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 P2RY2P41231 377 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 GPR15P49685 360 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 FAM193AP78312 1265 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 GUCY1B3Q02153 619 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 FAM160A1Q05DH4 1040 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 SCAPQ12770 1279 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 USP4Q13107 963 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 SEMA3BQ13214 749 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
SDF2-204ENST00000587338 ZNF77Q15935 545 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 ENOX2Q16206 610 aaKnown RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 CRY1Q16526 586 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 SDHAF4Q5VUM1 108 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 SPATA1Q5VX52 437 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 LYSMD4Q5XG99 296 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 LMBRD2Q68DH5 695 aaPredicted RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 JADE1Q6IE81 842 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 ZPBP2Q6X784 338 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 LRRTM3Q86VH5 581 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 METTL23Q86XA0 190 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 SYT12Q8IV01 421 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 EFCAB13Q8IY85 973 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 THEM5Q8N1Q8 247 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 FRMD1Q8N878 549 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 TMEM161BQ8NDZ6 487 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 C2orf15Q8WU43 125 aaKnown RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 OSCP1Q8WVF1 389 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 FNBP1Q96RU3 617 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 PYM1Q9BRP8 204 aaKnown RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 HAPLN2Q9GZV7 340 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 C17orf75Q9HAS0 396 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 BCCIPQ9P287 314 aaKnown RBP eCLIP9.23□□□□□ -0.93
SDF2-204ENST00000587338 MBD1Q9UIS9 605 aaPredicted RBP9.23□□□□□ -0.93
SDF2-204ENST00000587338 DSEQ9UL01 958 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 MMP17Q9ULZ9 603 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 DNM3Q9UQ16 869 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 KIAA1549LQ6ZVL6 1849 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 PI4KAP42356 2102 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 MYO16Q9Y6X6 1858 aa9.23□□□□□ -0.93
SDF2-204ENST00000587338 UPK3BL1B0FP48 263 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 UPK3BL2E5RIL1 263 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 K7EQS6 105 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 CYB561D2O14569 222 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 STX6O43752 255 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 OPHN1O60890 802 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 PRPF40AO75400 957 aaKnown RBP9.22□□□□□ -0.93
SDF2-204ENST00000587338 CYP11A1P05108 521 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 NFICP08651 508 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 CSH1P0DML2 217 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 CSH2P0DML3 217 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 PLS3P13797 630 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 HNRNPLP14866 589 aaKnown RBP eCLIP9.22□□□□□ -0.93
SDF2-204ENST00000587338 PDCP20941 246 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 SYT1P21579 422 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 ITPKAP23677 461 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 DDIT3P35638 169 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
SDF2-204ENST00000587338 SMTNP53814 917 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 SMARCB1Q12824 385 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 NR1H3Q13133 447 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
SDF2-204ENST00000587338 PKP1Q13835 747 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 KYAT1Q16773 422 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 ZNF423Q2M1K9 1284 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 EML3Q32P44 896 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 TTC38Q5R3I4 469 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 C9orf57Q5W0N0 161 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 RINT1Q6NUQ1 792 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 SLC23A3Q6PIS1 610 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 C1orf186Q6ZWK4 172 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 RAB44Q7Z6P3 723 aaPredicted RBP9.22□□□□□ -0.93
SDF2-204ENST00000587338 DCP1BQ8IZD4 617 aaKnown RBP9.22□□□□□ -0.93
SDF2-204ENST00000587338 OLIG1Q8TAK6 271 aa9.22□□□□□ -0.93
SDF2-204ENST00000587338 SH3RF2Q8TEC5 729 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms