RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 KLF6Q99612 283 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 TMBIM4Q9HC24 238 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CNTNAP2Q9UHC6 1331 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 UNGP13051 313 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 ITIH2P19823 946 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 GPD1P21695 349 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 EDNRBP24530 442 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 NUMBP49757 651 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 DUSP28Q4G0W2 176 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 IQCKQ8N0W5 287 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 TWNKQ96RR1 684 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CPXM1Q96SM3 734 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 PDZD7Q9H5P4 517 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 ZFYVE28Q9HCC9 887 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 TUBGCP4Q9UGJ1 667 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CAPN7Q9Y6W3 813 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 C17orf102A2RUQ5 167 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 TREHO43280 583 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CSPG5O95196 566 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 MMP3P08254 477 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 VDRP11473 427 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CCDC130P13994 396 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CHN1P15882 459 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 ARL4AP40617 200 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 DUPD1Q68J44 220 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 CROCCP2Q86T23 111 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 NLRP14Q86W24 1093 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 BARX2Q9UMQ3 279 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-208ENST00000585799 A6NNZ2 444 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 FOXO6A8MYZ6 492 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 KCNN4O15554 427 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 MMP8P22894 467 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 YY1P25490 414 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 PSEN2P49810 448 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 TUBB8Q3ZCM7 444 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 NUGGCQ68CJ6 796 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 EXD1Q8NHP7 514 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 PPTC7Q8NI37 304 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 FZD8Q9H461 694 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 ASB7Q9H672 318 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CA4P22748 312 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 EIF4BP23588 611 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 MIPP30301 263 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CHKAP35790 457 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 PEX5P50542 639 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 TAP1Q03518 808 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 RNASELQ05823 741 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 SHCBP1Q8NEM2 672 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CCT8L2Q96SF2 557 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 B3GNT5Q9BYG0 378 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 WDR35Q9P2L0 1181 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM169AQ9Y6X4 670 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 THPOP40225 353 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 MAGEA4P43358 317 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 TFDP2Q14188 446 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 TFDP3Q5H9I0 405 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 MFSD14CQ5VZR4 134 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM131BQ86XD5 332 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 SCN4BQ8IWT1 228 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 ALG13Q9NP73 1137 aaKnown RBP13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 RAB6BQ9NRW1 208 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 TXNDC16Q9P2K2 825 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CTNNAL1Q9UBT7 734 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 USP18Q9UMW8 372 aa13.07□□□□□ -0.32
SMARCA4-208ENST00000585799 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 IRX4P78413 519 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 LRIG3Q6UXM1 1119 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 FAM172AQ8WUF8 416 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.06□□□□□ -0.324e-6■■■■■ 29.8
SMARCA4-208ENST00000585799 GMNCA6NCL1 334 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 I3L4J1 428 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 PPEF2O14830 753 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 SNAI1O95863 264 aaPredicted RBP13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 RGS2P41220 211 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 CPT1AP50416 773 aa13.06□□□□□ -0.32
SMARCA4-208ENST00000585799 ROR1Q01973 937 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms