RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 GPD1LQ8N335 351 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 FSIP1Q8NA03 581 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 SMG9Q9H0W8 520 aaKnown RBP16.11■□□□□ 0.17
VAPA-209ENST00000585042 KIAA1586Q9HCI6 787 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 HPS4Q9NQG7 708 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 GTF3C4Q9UKN8 822 aa16.11■□□□□ 0.17
VAPA-209ENST00000585042 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 AKAP3O75969 853 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 FAM163BP0C2L3 166 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 USP17L7P0C7H9 530 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 TMEM191BP0C7N4 346 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 TCF3P15923 654 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 PFKLP17858 780 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 CYP2F1P24903 491 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 CASP5P51878 434 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 WNT7BP56706 349 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 FAM160A1Q05DH4 1040 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 MAPRE1Q15691 268 aaKnown RBP16.1■□□□□ 0.17
VAPA-209ENST00000585042 DDR2Q16832 855 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 FSTL4Q6MZW2 842 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 FAM171BQ6P995 826 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 C4orf50Q6ZRC1 276 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 SPATA2LQ8IUW3 424 aaPredicted RBP16.1■□□□□ 0.17
VAPA-209ENST00000585042 FAM160A2Q8N612 972 aaPredicted RBP16.1■□□□□ 0.17
VAPA-209ENST00000585042 KIAA1958Q8N8K9 716 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 CCDC26Q8TAB7 109 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 DDX1Q92499 740 aaKnown RBP16.1■□□□□ 0.17
VAPA-209ENST00000585042 ANKRD36BP1Q96IX9 119 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 PDE11AQ9HCR9 933 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 SIX4Q9UIU6 781 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 MAGED2Q9UNF1 606 aaPredicted RBP16.1■□□□□ 0.17
VAPA-209ENST00000585042 SLC8A2Q9UPR5 921 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 CCL26Q9Y258 94 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 SNX9Q9Y5X1 595 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 NCOR2Q9Y618 2525 aa16.1■□□□□ 0.17
VAPA-209ENST00000585042 ZNF638Q14966 1978 aaKnown RBP16.09■□□□□ 0.17
VAPA-209ENST00000585042 OTOL1A6NHN0 477 aaPredicted RBP16.09■□□□□ 0.17
VAPA-209ENST00000585042 KRT19P08727 400 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 PDE6CP51160 858 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 CDR1P51861 262 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 AMPD3Q01432 767 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 DUOXA2Q1HG44 320 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 HEATR6Q6AI08 1181 aaKnown RBP16.09■□□□□ 0.17
VAPA-209ENST00000585042 VSTM1Q6UX27 236 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 ADGRF2Q8IZF7 708 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 CPA6Q8N4T0 437 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 GAB3Q8WWW8 586 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 CBWD1Q9BRT8 395 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 TNMDQ9H2S6 317 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 CUEDC2Q9H467 287 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 PCIF1Q9H4Z3 704 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 C2orf42Q9NWW7 574 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 EHD2Q9NZN4 543 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
VAPA-209ENST00000585042 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.09■□□□□ 0.17
VAPA-209ENST00000585042 TRAV19A0A0A6YYK7 116 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 DCDC2BA2VCK2 349 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 TNNC2P02585 160 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 RAP1GAPP47736 663 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 PPP3CCP48454 512 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 NASPP49321 788 aaPredicted RBP16.08■□□□□ 0.16
VAPA-209ENST00000585042 GPR15P49685 360 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 GALK1P51570 392 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 LIMK1P53667 647 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 SNRPFP62306 86 aaKnown RBP16.08■□□□□ 0.16
VAPA-209ENST00000585042 CEBPZQ03701 1054 aaKnown RBP16.08■□□□□ 0.16
VAPA-209ENST00000585042 NR1H3Q13133 447 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 SRSF5Q13243 272 aaKnown RBP16.08■□□□□ 0.16
VAPA-209ENST00000585042 CNNM4Q6P4Q7 775 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 OSCP1Q8WVF1 389 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 ATP2A3Q93084 1043 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 ZC3H10Q96K80 434 aaKnown RBP16.08■□□□□ 0.16
VAPA-209ENST00000585042 P2RY13Q9BPV8 354 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 PANK2Q9BZ23 570 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 MTMR12Q9C0I1 747 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 ECT2Q9H8V3 914 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 KBTBD4Q9NVX7 518 aa16.08■□□□□ 0.16
VAPA-209ENST00000585042 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.16
VAPA-209ENST00000585042 RALGAPA1Q6GYQ0 2036 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.07■□□□□ 0.16
VAPA-209ENST00000585042 EIF3DO15371 548 aaKnown RBP eCLIP16.07■□□□□ 0.161e-10■□□□□ 9.8
VAPA-209ENST00000585042 TADA3O75528 432 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 RPP40O75818 363 aaKnown RBP16.07■□□□□ 0.16
VAPA-209ENST00000585042 PRPF6O94906 941 aaKnown RBP16.07■□□□□ 0.16
VAPA-209ENST00000585042 ZNF806P0C7X5 589 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
VAPA-209ENST00000585042 GJA4P35212 333 aa16.07■□□□□ 0.16
VAPA-209ENST00000585042 MTF1Q14872 753 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms