RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 DUSP4Q13115 394 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 ARHGAP44Q17R89 818 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 RARS2Q5T160 578 aaKnown RBP14.75□□□□□ -0.05
TRAF4-215ENST00000584944 ANKRD54Q6NXT1 300 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 TMEM270Q6UE05 265 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 RTL10Q7L3V2 364 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 OSTM1Q86WC4 334 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 SCN4BQ8IWT1 228 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 TCEAL8Q8IYN2 117 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 MYCBPAPQ8TBZ2 947 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 JAKMIP2Q96AA8 810 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 RIPOR3Q96MK2 946 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 TMEM209Q96SK2 561 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 ARID3AQ99856 593 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 KCNH6Q9H252 994 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 FAM207AQ9NSI2 230 aaPredicted RBP14.75□□□□□ -0.05
TRAF4-215ENST00000584944 ZDHHC7Q9NXF8 308 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 FBXW11Q9UKB1 542 aa14.75□□□□□ -0.05
TRAF4-215ENST00000584944 USP15Q9Y4E8 981 aaPredicted RBP14.75□□□□□ -0.05
TRAF4-215ENST00000584944 CCDC195A0A1B0GUA6 201 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 MTMR11A4FU01 709 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 LRRC10BA6NIK2 292 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ATP2C2O75185 946 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 LRRN2O75325 713 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 CILPO75339 1184 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 HNRNPA1P09651 372 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRAF4-215ENST00000584944 GRIK1P39086 918 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 RBM10P98175 930 aaKnown RBP14.74□□□□□ -0.05
TRAF4-215ENST00000584944 FANCCQ00597 558 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ITIH3Q06033 890 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 INCA1Q0VD86 236 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ORC1Q13415 861 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 CBX2Q14781 532 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-215ENST00000584944 SYCP1Q15431 976 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ATAT1Q5SQI0 421 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 TMC5Q6UXY8 1006 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 TMEM184AQ6ZMB5 413 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 LIMS2Q7Z4I7 341 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ITIH5Q86UX2 942 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ARHGEF19Q8IW93 802 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ATAD1Q8NBU5 361 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 VN1R2Q8NFZ6 395 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 SMG7Q92540 1137 aaKnown RBP14.74□□□□□ -0.05
TRAF4-215ENST00000584944 EDAQ92838 391 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 MYLPFQ96A32 169 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 TMEM176AQ96HP8 235 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 FUBP3Q96I24 572 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ZNF512Q96ME7 567 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-215ENST00000584944 SPAG5Q96R06 1193 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 RTP3Q9BQQ7 232 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 SDCBP2Q9H190 292 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 DPEP3Q9H4B8 488 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 ABCB6Q9NP58 842 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 FAM49BQ9NUQ9 324 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 HESX1Q9UBX0 185 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 SLC27A5Q9Y2P5 690 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 INSL5Q9Y5Q6 135 aa14.74□□□□□ -0.05
TRAF4-215ENST00000584944 MYBPHLA2RUH7 354 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 CCL16O15467 120 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 HCRTO43612 131 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 ZMYND10O75800 440 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 KCNC3Q14003 757 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 SGO2Q562F6 1265 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 PHLDB3Q6NSJ2 640 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 LILRA6Q6PI73 481 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 C12orf76Q8N812 135 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-215ENST00000584944 LMO3Q8TAP4 145 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 SUSD6Q92537 303 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 PHF7Q9BWX1 381 aaPredicted RBP14.73□□□□□ -0.05
TRAF4-215ENST00000584944 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 DNAJC12Q9UKB3 198 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 KIAA1257Q9ULG3 409 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 DAAM1Q9Y4D1 1078 aa14.73□□□□□ -0.05
TRAF4-215ENST00000584944 TRIM66O15016 1216 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 MED7O43513 233 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 BDNFP23560 247 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 ADORA2BP29275 332 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 MTHFRP42898 656 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 TWF1Q12792 350 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 KLHDC7AQ5VTJ3 777 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 VSTM1Q6UX27 236 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 CYP26C1Q6V0L0 522 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 BMP8AQ7Z5Y6 402 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 ALYREFQ86V81 257 aaKnown RBP14.72□□□□□ -0.05
TRAF4-215ENST00000584944 LRRTM3Q86VH5 581 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 CRYBG2Q8N1P7 616 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 RBBP8NLQ8NC74 664 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-215ENST00000584944 SMARCD1Q96GM5 515 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 PCED1BQ96HM7 432 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 GCNAQ96QF7 691 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 HSD3B7Q9H2F3 369 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 PDCL3Q9H2J4 239 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 ADAM7Q9H2U9 754 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 PLCB1Q9NQ66 1216 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 CRTAC1Q9NQ79 661 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 RTN4Q9NQC3 1192 aaKnown RBP14.72□□□□□ -0.05
TRAF4-215ENST00000584944 EHD2Q9NZN4 543 aa14.72□□□□□ -0.05
TRAF4-215ENST00000584944 IFNKQ9P0W0 207 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms