RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 FUBP3Q96I24 572 aaKnown RBP eCLIP19.43■□□□□ 0.7
RFFL-211ENST00000584541 KLHL5Q96PQ7 755 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 HNRNPABQ99729 332 aaKnown RBP19.43■□□□□ 0.7
RFFL-211ENST00000584541 LPIN3Q9BQK8 851 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 CEP83Q9Y592 693 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 PLXNA3P51805 1871 aa19.43■□□□□ 0.7
RFFL-211ENST00000584541 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 HIDE1A8MVS5 230 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 RFXAPO00287 272 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 O00370 1275 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 ADAM12O43184 909 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 NRDCO43847 1150 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 TNFAIP3P21580 790 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 SLC8A3P57103 927 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 CDK17Q00537 523 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 MEA1Q16626 185 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 GOLGA7BQ2TAP0 167 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 TAF3Q5VWG9 929 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 LCLAT1Q6UWP7 414 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 ZNF461Q8TAF7 563 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 PGLYRP2Q96PD5 576 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 AGPAT1Q99943 283 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 B3GNT5Q9BYG0 378 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 DEF6Q9H4E7 631 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 SEPT11Q9NVA2 429 aaKnown RBP19.42■□□□□ 0.7
RFFL-211ENST00000584541 TMLHEQ9NVH6 421 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 ABI2Q9NYB9 513 aaPredicted RBP19.42■□□□□ 0.7
RFFL-211ENST00000584541 AFF4Q9UHB7 1163 aaKnown RBP19.42■□□□□ 0.7
RFFL-211ENST00000584541 NOCTQ9UK39 431 aaKnown RBP19.42■□□□□ 0.7
RFFL-211ENST00000584541 TSPAN16Q9UKR8 245 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 MAFFQ9ULX9 164 aa19.42■□□□□ 0.7
RFFL-211ENST00000584541 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.42■□□□□ 0.7
RFFL-211ENST00000584541 MTCL1Q9Y4B5 1905 aaKnown RBP19.42■□□□□ 0.7
RFFL-211ENST00000584541 MTMR11A4FU01 709 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 FAM200BP0CF97 657 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 ELF1P32519 619 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 CFAP221Q4G0U5 840 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 HGSNATQ68CP4 663 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 WDR59Q6PJI9 974 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 CYP26C1Q6V0L0 522 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 RNF19BQ6ZMZ0 732 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 FAM35AQ86V20 835 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 PALB2Q86YC2 1186 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 FUKQ8N0W3 1084 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 SLC20A1Q8WUM9 679 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 SMARCD1Q96GM5 515 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 PPP1R9BQ96SB3 815 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 ABCB6Q9NP58 842 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 PCDHGC3Q9UN70 934 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 PCDHGC5Q9Y5F6 944 aa19.41■□□□□ 0.7
RFFL-211ENST00000584541 TRIOBPQ9H2D6 2365 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 M0QYV0 167 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 CLDN5O00501 218 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 SOX1O00570 391 aaPredicted RBP19.4■□□□□ 0.7
RFFL-211ENST00000584541 MICAL2O94851 1124 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 ABLIM3O94929 683 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 MMEP08473 750 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 BDNFP23560 247 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 BCAT1P54687 386 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 ADCY1Q08828 1119 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 CCDC142Q17RM4 750 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 TRIM72Q6ZMU5 477 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 ANKRD52Q8NB46 1076 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 DDX1Q92499 740 aaKnown RBP19.4■□□□□ 0.7
RFFL-211ENST00000584541 CCDC42Q96M95 316 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 BAG1Q99933 345 aaPredicted RBP19.4■□□□□ 0.7
RFFL-211ENST00000584541 ZSWIM1Q9BR11 485 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.4■□□□□ 0.7
RFFL-211ENST00000584541 ZNF518BQ9C0D4 1074 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 TTYH1Q9H313 450 aaPredicted RBP19.4■□□□□ 0.7
RFFL-211ENST00000584541 PRDM12Q9H4Q4 367 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 KRT82Q9NSB4 513 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 LMCD1Q9NZU5 365 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 ARHGAP20Q9P2F6 1191 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 HSFX1Q9UBD0 423 aa19.4■□□□□ 0.7
RFFL-211ENST00000584541 MYO9BQ13459 2157 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 SSU72P8A0A1W2PR75 194 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 AP1G2O75843 785 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 GLUD1P00367 558 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 C1RP00736 705 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 ATF2P15336 505 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 ANXA13P27216 316 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 SSTR3P32745 418 aaPredicted RBP19.39■□□□□ 0.69
RFFL-211ENST00000584541 FMO1Q01740 532 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
RFFL-211ENST00000584541 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
RFFL-211ENST00000584541 VSTM1Q6UX27 236 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 ZNF571Q7Z3V5 609 aaPredicted RBP19.39■□□□□ 0.69
RFFL-211ENST00000584541 TMTC1Q8IUR5 882 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 ATAD1Q8NBU5 361 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 CCDC112Q8NEF3 446 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 LRCH3Q96II8 777 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 DUSP16Q9BY84 665 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 LHX5Q9H2C1 402 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 TLE6Q9H808 572 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 DPP7Q9UHL4 492 aa19.39■□□□□ 0.69
RFFL-211ENST00000584541 PRRG1O14668 218 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 TRIM66O15016 1216 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 TGM5O43548 720 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms