RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 EXOC3L1Q86VI1 746 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 MSL3Q8N5Y2 521 aaKnown RBP12.5□□□□□ -0.41
ERBB2-218ENST00000584450 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 ZNF516Q92618 1163 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 GCOM2Q9BZD3 368 aaPredicted RBP12.5□□□□□ -0.41
ERBB2-218ENST00000584450 SHCBP1LQ9BZQ2 653 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 NACA2Q9H009 215 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 PRMT7Q9NVM4 692 aaPredicted RBP12.5□□□□□ -0.41
ERBB2-218ENST00000584450 DPP3Q9NY33 737 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 SLC5A4Q9NY91 659 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 USP18Q9UMW8 372 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 TGFB2P61812 414 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 KDSRQ06136 332 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 BMPR2Q13873 1038 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 KLHL38Q2WGJ6 581 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 SLFN11Q7Z7L1 901 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 BRSK2Q8IWQ3 736 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 MCUQ8NE86 351 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 USP33Q8TEY7 942 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 APOBEC3GQ9HC16 384 aaKnown RBP12.5□□□□□ -0.41
ERBB2-218ENST00000584450 PSMC3IPQ9P2W1 217 aaPredicted RBP12.5□□□□□ -0.41
ERBB2-218ENST00000584450 HAO1Q9UJM8 370 aa12.5□□□□□ -0.41
ERBB2-218ENST00000584450 ASB14A6NK59 587 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 GPD1P21695 349 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SEPT6Q14141 434 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 TAF11Q15544 211 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 JADE1Q6IE81 842 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 NUDCD3Q8IVD9 361 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 C12orf65Q9H3J6 166 aaKnown RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 DIAPH2O60879 1101 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 CYP2C9P11712 490 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 NRLP54845 237 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 FASTKD5Q7L8L6 764 aaKnown RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 WDR49Q8IV35 697 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 KLRG1Q96E93 195 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SLCO1B3Q9NPD5 702 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SYNPO2Q9UMS6 1093 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 L3MBTL1Q9Y468 752 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 MYH11P35749 1972 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 KAT6AQ92794 2004 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 CHD4Q14839 1912 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 H3BRB1 525 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 PDHA1P08559 390 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SRGAP2BP0DMP2 458 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 TCF4P15884 667 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 MIPP30301 263 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 ADCYAP1R1P41586 468 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 TAP1Q03518 808 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 TSNAXIP1Q2TAA8 658 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SGSM3Q96HU1 749 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 TUT1Q9H6E5 874 aaKnown RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 CYP4F11Q9HBI6 524 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
ERBB2-218ENST00000584450 PHTF1Q9UMS5 762 aa12.49□□□□□ -0.41
ERBB2-218ENST00000584450 CCL15-CCL14A0A0B4J2E2 113 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 ACAT1P24752 427 aaKnown RBP12.48□□□□□ -0.41
ERBB2-218ENST00000584450 EPHB1P54762 984 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-218ENST00000584450 TAF12Q16514 161 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 CCL15Q16663 113 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
ERBB2-218ENST00000584450 ERO1BQ86YB8 467 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 CD302Q8IX05 232 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 KIAA0319LQ8IZA0 1049 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 FAM172AQ8WUF8 416 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 CCDC124Q96CT7 223 aaKnown RBP12.48□□□□□ -0.41
ERBB2-218ENST00000584450 TMEM176AQ96HP8 235 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 TSPAN16Q9UKR8 245 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 UBR2Q8IWV8 1755 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 E5RJQ4 531 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 KRT38O76015 456 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 HAUS5O94927 633 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 FASTKD3Q14CZ7 662 aaKnown RBP12.48□□□□□ -0.41
ERBB2-218ENST00000584450 LMNTD2Q8IXW0 634 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 PPIL6Q8IXY8 311 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 PIK3R5Q8WYR1 880 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 FIZ1Q96SL8 496 aa12.48□□□□□ -0.41
ERBB2-218ENST00000584450 IFT122Q9HBG6 1241 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms