RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 GRASPQ7Z6J2 395 aaPredicted RBP4.51□□□□□ -1.69
VAPA-206ENST00000583475 C14orf80Q86SX3 495 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 ARHGEF25Q86VW2 580 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 ZNF280BQ86YH2 543 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 OR6B3Q8NGW1 331 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 UROC1Q96N76 676 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 MESP1Q9BRJ9 268 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 SERTAD4Q9NUC0 356 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 ASB6Q9NWX5 421 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 NDRG4Q9ULP0 352 aaKnown RBP4.51□□□□□ -1.69
VAPA-206ENST00000583475 ST3GAL5Q9UNP4 418 aa4.51□□□□□ -1.69
VAPA-206ENST00000583475 MRPS17Q9Y2R5 130 aaKnown RBP4.51□□□□□ -1.69
VAPA-206ENST00000583475 FAM227AF5H4B4 570 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 MYO1CO00159 1063 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 ORC4O43929 436 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 TBC1D4O60343 1298 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 ERBB2P04626 1255 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 CYP2C9P11712 490 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 JUPP14923 745 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 WT1P19544 449 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 EN2P19622 333 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 PPIFP30405 207 aaKnown RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 SLC7A1P30825 629 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 WNT3P56703 355 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 BMPR2Q13873 1038 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 GRM3Q14832 879 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 CNN3Q15417 329 aaKnown RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 ZIK1Q3SY52 487 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 ARHGAP40Q5TG30 622 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 LMBRD2Q68DH5 695 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 APOA5Q6Q788 366 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 ZNF783Q6ZMS7 281 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 CHST15Q7LFX5 561 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 MAVSQ7Z434 540 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 TTC8Q8TAM2 541 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 MAML1Q92585 1016 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 ZNF764Q96H86 408 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 KLHL42Q9P2K6 505 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 ARPP21Q9UBL0 812 aaPredicted RBP4.5□□□□□ -1.69
VAPA-206ENST00000583475 SERTAD3Q9UJW9 196 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 SHOC2Q9UQ13 582 aa4.5□□□□□ -1.69
VAPA-206ENST00000583475 SPATA31A6Q5VVP1 1343 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 CFAP69A5D8W1 941 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 GOLGA6CA6NDK9 693 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 GOLGA6BA6NDN3 693 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 VSTM5A8MXK1 200 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 TMEM233B4DJY2 109 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 TBX3O15119 743 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 PPM1GO15355 546 aaPredicted RBP4.49□□□□□ -1.69
VAPA-206ENST00000583475 HRGP04196 525 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 GOLGA6DP0CG33 693 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 FBLP22087 321 aaKnown RBP4.49□□□□□ -1.69
VAPA-206ENST00000583475 PCSK6P29122 969 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 LIPAP38571 399 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 SUMO3P55854 103 aaPredicted RBP4.49□□□□□ -1.69
VAPA-206ENST00000583475 NHLH1Q02575 133 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 MYO1EQ12965 1108 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 EIF2B5Q13144 721 aaKnown RBP4.49□□□□□ -1.69
VAPA-206ENST00000583475 SLC13A2Q13183 592 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 E2F2Q14209 437 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 AKNAD1Q5T1N1 836 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 TSTD2Q5T7W7 516 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 CYB5RLQ6IPT4 315 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 RGS7BPQ6MZT1 257 aaPredicted RBP4.49□□□□□ -1.69
VAPA-206ENST00000583475 GAS2L3Q86XJ1 694 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 ATRIPQ8WXE1 791 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 HAPLN3Q96S86 360 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 FAM204AQ9H8W3 233 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 CPNE5Q9HCH3 593 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 ARHGEF3Q9NR81 526 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 STK32BQ9NY57 414 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 GOLGA6AQ9NYA3 693 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 PTGFRNQ9P2B2 879 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 CPNE7Q9UBL6 633 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 ADAM21Q9UKJ8 722 aa4.49□□□□□ -1.69
VAPA-206ENST00000583475 SLC16A3O15427 465 aaKnown RBP4.48□□□□□ -1.69
VAPA-206ENST00000583475 FRS3O43559 492 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 TLR5O60602 858 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 PROP1O75360 226 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 URI1O94763 535 aaPredicted RBP4.48□□□□□ -1.69
VAPA-206ENST00000583475 TTLL1O95922 423 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 CSF1RP07333 972 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 XRCC6P12956 609 aaKnown RBP eCLIP4.48□□□□□ -1.69
VAPA-206ENST00000583475 LRPAP1P30533 357 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 DGKEP52429 567 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 SOX10P56693 466 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 GBX1Q14549 363 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 GFOD2Q3B7J2 385 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 ZNF618Q5T7W0 954 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 RNF220Q5VTB9 566 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 ZNF551Q7Z340 670 aaPredicted RBP4.48□□□□□ -1.69
VAPA-206ENST00000583475 RASAL3Q86YV0 1011 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 FMNL3Q8IVF7 1028 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 FAM156AQ8NDB6 213 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 ZNF384Q8TF68 577 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 ATG4AQ8WYN0 398 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 NELL1Q92832 810 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 SUCLG2Q96I99 432 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 ZNF518BQ9C0D4 1074 aa4.48□□□□□ -1.69
VAPA-206ENST00000583475 MS4A7Q9GZW8 240 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms