RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 NOSTRINQ8IVI9 506 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 SULF2Q8IWU5 870 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 SLC7A14Q8TBB6 771 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 KCNG4Q8TDN1 519 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 RSPRY1Q96DX4 576 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 NFKBIZQ9BYH8 718 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 SLKQ9H2G2 1235 aaPredicted RBP8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 FZD8Q9H461 694 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 PLEKHA4Q9H4M7 779 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 ZSWIM4Q9H7M6 989 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 ANAPC1Q9H1A4 1944 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 STK36Q9NRP7 1315 aa8.69□□□□□ -1.02
PPP4R1-225ENST00000583438 CCDC194A0A1B0GVG4 234 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 KANSL1LA0AUZ9 987 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 BTBD18B2RXH4 712 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ABLIM1O14639 778 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 TBX3O15119 743 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ASAP2O43150 1006 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 PFKFB2O60825 505 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 SEC24AO95486 1093 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 MAOBP27338 520 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ARNTP27540 789 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 AXLP30530 894 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 OR1D2P34982 312 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 POU5F1BQ06416 359 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 BMS1Q14692 1282 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 POU4F3Q15319 338 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 SLC44A4Q53GD3 710 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 NT5DC1Q5TFE4 455 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 TANGO2Q6ICL3 276 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 CYP26C1Q6V0L0 522 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 DGLUCYQ7Z3D6 616 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 PDZD3Q86UT5 571 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 CEP57Q86XR8 500 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ZBTB44Q8NCP5 570 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 CNNM3Q8NE01 707 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 TCP11Q8WWU5 503 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 RNF34Q969K3 372 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 CLDN23Q96B33 292 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 CCDC51Q96ER9 411 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ZSWIM3Q96MP5 696 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ZMAT2Q96NC0 199 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 PPP1R10Q96QC0 940 aaKnown RBP8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 JPH2Q9BR39 696 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 COLEC11Q9BWP8 271 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 PIDD1Q9HB75 910 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 LTB4R2Q9NPC1 389 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 PRMT8Q9NR22 394 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 HEBP1Q9NRV9 189 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 GGT7Q9UJ14 662 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
PPP4R1-225ENST00000583438 LOC100289279A0A1B0GTE1 492 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 WDR27A2RRH5 827 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 LRRIQ4A6NIV6 560 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM170BA6NMN3 283 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 TBC1D4O60343 1298 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 SF3B1O75533 1304 aaKnown RBP eCLIP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 DLGAP3O95886 979 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 CYP11A1P05108 521 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 GCFC2P16383 781 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 HELZP42694 1942 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 LIG3P49916 1009 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 CLCNKBP51801 687 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 ATXN1P54253 815 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 AKAP13Q12802 2813 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 MTAPQ13126 283 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 TUSC3Q13454 348 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 RAB33AQ14088 237 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 MXD4Q14582 209 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 UBXN2BQ14CS0 331 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 SPEGQ15772 3267 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 LPAL2Q16609 132 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 ME3Q16798 604 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 FAM187BQ17R55 369 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 AXDND1Q5T1B0 1012 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 IGF2-ASQ6U949 168 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 TPRG1Q6ZUI0 275 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 HS2ST1Q7LGA3 356 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 CATSPER3Q86XQ3 398 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 GPR65Q8IYL9 337 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 GRIN3AQ8TCU5 1115 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 RUBCNQ92622 972 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 STAMQ92783 540 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 MCRS1Q96EZ8 462 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 TTPALQ9BTX7 342 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 RSRP1Q9BUV0 290 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 C22orf23Q9BZE7 217 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 TM6SF1Q9BZW5 370 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 TTC12Q9H892 705 aaPredicted RBP8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 UBN1Q9NPG3 1134 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 ANKEF1Q9NU02 776 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 PDRG1Q9NUG6 133 aa8.67□□□□□ -1.02
PPP4R1-225ENST00000583438 MTRRQ9UBK8 725 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms