RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 U2AF2P26368 475 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 RPA1P27694 616 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 PDE6CP51160 858 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 DMP1Q13316 513 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 KYAT1Q16773 422 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 C2orf27AQ580R0 203 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TOGARAM2Q6ZUX3 1019 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ARMCX6Q7L4S7 300 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 GALNT15Q8N3T1 639 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TTC9BQ8N6N2 239 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 MDM1Q8TC05 714 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 WASF1Q92558 559 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 EZH1Q92800 747 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 DRC1Q96MC2 740 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 AIFM3Q96NN9 605 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ZDHHC5Q9C0B5 715 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 FAM124BQ9H5Z6 455 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 SUSD2Q9UGT4 822 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ITPR1Q14643 2758 aa9.48□□□□□ -0.89
CDK5RAP3-224ENST00000582275 A0A087WWV3 80 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TRAV19A0A0A6YYK7 116 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 A0A1W2PQD8 194 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 MYMKA6NI61 221 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ZBTB24O43167 697 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 SH3BP5O60239 455 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TOM1L1O75674 476 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 F11P03951 625 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 USP17L7P0C7H9 530 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 PLA2G2AP14555 144 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ATF6P18850 670 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 KRT2P35908 639 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ABCG1P45844 678 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 SEC13P55735 322 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 STRN3Q13033 797 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 NBR1Q14596 966 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 NOLC1Q14978 699 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 EML3Q32P44 896 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 SLC10A6Q3KNW5 377 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 SLC39A12Q504Y0 691 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 BMP2KLQ5H9B9 411 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TMPRSS7Q7RTY8 843 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 METTL23Q86XA0 190 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 NAXDQ8IW45 347 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 THEM5Q8N1Q8 247 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 CCDC33Q8N5R6 958 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 KIAA1958Q8N8K9 716 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 RLN3Q8WXF3 142 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 MTMR9Q96QG7 549 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TARS2Q9BW92 718 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 C17orf75Q9HAS0 396 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 TUBGCP4Q9UGJ1 667 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 STK36Q9NRP7 1315 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 KIAA1549LQ6ZVL6 1849 aa9.47□□□□□ -0.89
CDK5RAP3-224ENST00000582275 PLXND1Q9Y4D7 1925 aa9.46□□□□□ -0.89
CDK5RAP3-224ENST00000582275 SHROOM3Q8TF72 1996 aa9.46□□□□□ -0.89
CDK5RAP3-224ENST00000582275 FREM2Q5SZK8 3169 aa9.46□□□□□ -0.89
CDK5RAP3-224ENST00000582275 GOLGA4Q13439 2230 aaKnown RBP9.46□□□□□ -0.89
CDK5RAP3-224ENST00000582275 E9PAM4 449 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 K7EQS6 105 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 MED24O75448 989 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 CYP11A1P05108 521 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 CLTAP09496 248 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 HAPLN1P10915 354 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 GNSP15586 552 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 TCF3P15923 654 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 EIF2DP41214 584 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 NPTX2P47972 431 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 PEX3P56589 373 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 RPL6Q02878 288 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 PPP2R3AQ06190 1150 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 ZNF33AQ06730 810 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 USP4Q13107 963 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 ZNF77Q15935 545 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 NAIF1Q69YI7 327 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 TXNDC8Q6A555 127 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 TMEM150AQ86TG1 271 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 DCP1BQ8IZD4 617 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 PGBD3Q8N328 593 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 FSIP1Q8NA03 581 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 SPATA18Q8TC71 538 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 GIPC2Q8TF65 315 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 SENP8Q96LD8 212 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 PI4K2AQ9BTU6 479 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 KMT5AQ9NQR1 393 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 ARHGAP28Q9P2N2 729 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 RAI2Q9Y5P3 530 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 SNX14Q9Y5W7 946 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 WNT6Q9Y6F9 365 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 TNRC6BQ9UPQ9 1833 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 ATXN2Q99700 1313 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 DENND4CQ5VZ89 1909 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 PLXNB3Q9ULL4 1909 aa9.46□□□□□ -0.9
CDK5RAP3-224ENST00000582275 KNTC1P50748 2209 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms