RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KRT85P78386 507 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 KIF23Q02241 960 aaPredicted RBP4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 TWIST1Q15672 202 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 ICE2Q659A1 982 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 PGM2L1Q6PCE3 622 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 TMEM108Q6UXF1 575 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 MEPCEQ7L2J0 689 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 USP37Q86T82 979 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 ATL2Q8NHH9 583 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 RP9Q8TA86 221 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 ADAMTS15Q8TE58 950 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 FAXDC2Q96IV6 333 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 TEKT5Q96M29 485 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 SIK2Q9H0K1 926 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 GNL3LQ9NVN8 582 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 TRNAU1APQ9NX07 287 aaKnown RBP4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 KLHL13Q9P2N7 655 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 ZDHHC8Q9ULC8 765 aa4.52□□□□□ -1.69
SMCHD1-206ENST00000581631 FCHO1O14526 889 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 ERC2O15083 957 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 PHKA1P46020 1223 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 LRRC41Q15345 812 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 FCRL6Q6DN72 434 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 SFRP4Q6FHJ7 346 aaPredicted RBP4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 KIRREL2Q6UWL6 708 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 CNGA4Q8IV77 575 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 C16orf52Q8NHV5 167 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 ATG4AQ8WYN0 398 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 MARK4Q96L34 752 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 PUS7LQ9H0K6 701 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 MKS1Q9NXB0 559 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 HESX1Q9UBX0 185 aa4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 SCAF8Q9UPN6 1271 aaKnown RBP4.51□□□□□ -1.69
SMCHD1-206ENST00000581631 KLHL33A6NCF5 533 aa4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 MT-CO1P00395 513 aa4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 FGBP02675 491 aa4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 FESP07332 822 aa4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 CYP2A6P11509 494 aaPredicted RBP4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 MEX3CQ5U5Q3 659 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 Q6ZWC4 215 aa4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 PARS2Q7L3T8 475 aaKnown RBP4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 GABRQQ9UN88 632 aa4.5□□□□□ -1.69
SMCHD1-206ENST00000581631 IGKV2D-30A0A075B6S6 120 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 POC1B-GALNT4F8VUJ3 575 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 M0QYG6 137 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 RPLP2P05387 115 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 NPSP0C0P6 89 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 PIM1P11309 404 aaPredicted RBP4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 PPIFP30405 207 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 PLCD1P51178 756 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 ACAP2Q15057 778 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 FAM160B1Q5W0V3 765 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 MIS18BP1Q6P0N0 1132 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 NECAB2Q7Z6G3 386 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 MRPL10Q7Z7H8 261 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 PIP4P1Q86T03 277 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 GALNT4Q8N4A0 578 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 NANOGP1Q8N7R0 232 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 PRSS3P2Q8NHM4 247 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 DDX17Q92841 729 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 SLC46A1Q96NT5 459 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 MRPL46Q9H2W6 279 aaKnown RBP4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 SPC25Q9HBM1 224 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 SLAMF7Q9NQ25 335 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 SERTAD3Q9UJW9 196 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 SBNO2Q9Y2G9 1366 aa4.49□□□□□ -1.69
SMCHD1-206ENST00000581631 MYMKA6NI61 221 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 CHRM5P08912 532 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 THBS3P49746 956 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 ADKP55263 362 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 LOXL3P58215 753 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 NANOS2P60321 138 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 SRSF1Q07955 248 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 TRIM71Q2Q1W2 868 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 DDX42Q86XP3 938 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 LRRC71Q8N4P6 559 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 C3orf20Q8ND61 904 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 FAM46DQ8NEK8 389 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 ZNF398Q8TD17 642 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 GLG1Q92896 1179 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 DAZAP1Q96EP5 407 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 LENG8Q96PV6 779 aaPredicted RBP4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 SNX18Q96RF0 628 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 WDCPQ9H6R7 721 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 MCM8Q9UJA3 840 aa4.48□□□□□ -1.69
SMCHD1-206ENST00000581631 TCRBV5S1A1TA0A578 114 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 FAM90A10PA6NDY2 464 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 ARIH2O95376 493 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 PRF1P14222 555 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 IL1R2P27930 398 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 GTF2H3Q13889 308 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 PCBP2Q15366 365 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 LEXMQ3ZCV2 418 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 RNF187Q5TA31 235 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 DLK2Q6UY11 383 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 ZNF813Q6ZN06 617 aa4.47□□□□□ -1.69
SMCHD1-206ENST00000581631 PPP1R3BQ86XI6 285 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms