RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ACTRT3Q9BYD9 372 aa5.6□□□□□ -1.51
SMCHD1-204ENST00000581226 TOR3AQ9H497 397 aa5.6□□□□□ -1.51
SMCHD1-204ENST00000581226 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
SMCHD1-204ENST00000581226 SNX13Q9Y5W8 968 aa5.6□□□□□ -1.51
SMCHD1-204ENST00000581226 PYCARD-AS1I3L0S3 204 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 APAF1O14727 1248 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 RHOBTB3O94955 611 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 LRPAP1P30533 357 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 NXPH1P58417 271 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 RPS16P62249 146 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 MRPS35P82673 323 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 KRT17Q04695 432 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 KRTAP1-1Q07627 177 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 MGAT5BQ3V5L5 792 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 ARHGAP40Q5TG30 622 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 GAS2L3Q86XJ1 694 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 ZNF280BQ86YH2 543 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 KRT78Q8N1N4 520 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 FAM109AQ8N4B1 249 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 PHKBQ93100 1093 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 MRIQ9BWK5 157 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 PCGF6Q9BYE7 350 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 BTBD1Q9H0C5 482 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 LRIT1Q9P2V4 623 aa5.59□□□□□ -1.51
SMCHD1-204ENST00000581226 A0A087X1B8 175 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 RHPN2P1A8MT19 583 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 hCG_1984214I3L0E3 225 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 PPM1DO15297 605 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 MPPED1O15442 326 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 RASSF9O75901 435 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 MYL1P05976 194 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 CHRM2P08172 466 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 PHKG2P15735 406 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 ADRA1BP35368 520 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 PLA2G5P39877 138 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 E2F2Q14209 437 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 PTPRRQ15256 657 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 PLA1AQ53H76 456 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 OR56A3Q8NH54 315 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 SPSB4Q96A44 273 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 CHFRQ96EP1 664 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 STK31Q9BXU1 1019 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 IKZF4Q9H2S9 585 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 ARNT2Q9HBZ2 717 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 SERTAD3Q9UJW9 196 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 NDRG4Q9ULP0 352 aaKnown RBP5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 CORO2BQ9UQ03 480 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 TBC1D30Q9Y2I9 924 aa5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 MRPS17Q9Y2R5 130 aaKnown RBP5.58□□□□□ -1.52
SMCHD1-204ENST00000581226 SALL3Q9BXA9 1300 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 WDR33Q9C0J8 1336 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 MBD3L4A6NDZ8 208 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 MBD3L3A6NE82 208 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 PMM2O15305 246 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 RHOP08100 348 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 PDHA1P08559 390 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 NBPF7P0C2Y1 421 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 SLC5A1P13866 664 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 KLRC1P26715 233 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 PPIFP30405 207 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 PIK3CBP42338 1070 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 DGKEP52429 567 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 MYO1EQ12965 1108 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 KAZNQ674X7 775 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 RGS7BPQ6MZT1 257 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 ZDHHC24Q6UX98 284 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 NOL8Q76FK4 1167 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 GPR150Q8NGU9 434 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 ACTRT2Q8TDY3 377 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 SLC9A6Q92581 669 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 FKBP10Q96AY3 582 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 MSLNLQ96KJ4 702 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 STRBPQ96SI9 672 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 KLC4Q9NSK0 619 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 DMRT1Q9Y5R6 373 aa5.57□□□□□ -1.52
SMCHD1-204ENST00000581226 ADGRA2Q96PE1 1338 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 ANO9A1A5B4 782 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 ADM5C9JUS6 153 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 PROZP22891 400 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 PRKAG1P54619 331 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 EIF2B5Q13144 721 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 TBCCQ15814 346 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 ZIK1Q3SY52 487 aaPredicted RBP5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 KIAA0895LQ68EN5 471 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 CCSAPQ6IQ19 270 aaPredicted RBP5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 PPP1R9BQ96SB3 815 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 TBCBQ99426 244 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 NAA15Q9BXJ9 866 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 UNKQ9C0B0 810 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 PNPLA8Q9NP80 782 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 SERHLQ9NQF3 203 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 XPNPEP3Q9NQH7 507 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 ITGB1BP2Q9UKP3 347 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 HDAC9Q9UKV0 1011 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 SSX2IPQ9Y2D8 614 aa5.56□□□□□ -1.52
SMCHD1-204ENST00000581226 LOC102723971A0A1B0GUV8 181 aa5.55□□□□□ -1.52
SMCHD1-204ENST00000581226 VWC2LB2RUY7 222 aa5.55□□□□□ -1.52
SMCHD1-204ENST00000581226 F8W8V4 182 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms