RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 CKMP06732 381 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 SEC13P55735 322 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 IRX4P78413 519 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 DDR2Q16832 855 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 EML3Q32P44 896 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 SV2CQ496J9 727 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 C2orf27AQ580R0 203 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 RILPL1Q5EBL4 403 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 ANO7Q6IWH7 933 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 GPBP1Q86WP2 473 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 TTC30AQ86WT1 665 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 FSIP1Q8NA03 581 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 STKLD1Q8NE28 680 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 RIN3Q8TB24 985 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 PIGKQ92643 395 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 MYRFLQ96LU7 910 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 REEP2Q9BRK0 252 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 TPSD1Q9BZJ3 242 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 SLC32A1Q9H598 525 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 TMLHEQ9NVH6 421 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 AGO2Q9UKV8 859 aaKnown RBP10.69□□□□□ -0.7
RFFL-208ENST00000581039 KIF26AQ9ULI4 1882 aaPredicted RBP10.69□□□□□ -0.7
RFFL-208ENST00000581039 IGF2RP11717 2491 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 SRRM3A6NNA2 597 aaPredicted RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 ANKRD63C9JTQ0 380 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 MAP3K13O43283 966 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ALDH1A2O94788 518 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 NOL4O94818 638 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 HOXB3P14651 431 aaPredicted RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 HDCP19113 662 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 CYP2F1P24903 491 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 PNPLA4P41247 253 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ZNF131P52739 623 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ATP2C1P98194 919 aaPredicted RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 GTF2BQ00403 316 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 POU5F1Q01860 360 aaKnown RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 LMAN2Q12907 356 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ACAP1Q15027 740 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ZNF77Q15935 545 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 TMEM119Q4V9L6 283 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 SLC39A4Q6P5W5 647 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 RASSF3Q86WH2 238 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 EFCAB13Q8IY85 973 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ARL14EPQ8N8R7 260 aaPredicted RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 DEFB124Q8NES8 71 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 USP33Q8TEY7 942 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 CALML4Q96GE6 196 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 TRMT2BQ96GJ1 504 aaKnown RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 ZNF560Q96MR9 790 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 SLC22A12Q96S37 553 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ACBD6Q9BR61 282 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 TMEM121BQ9BXQ6 578 aaPredicted RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 LINC00597Q9H2U6 94 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 ABCB6Q9NP58 842 aa10.68□□□□□ -0.7
RFFL-208ENST00000581039 DDX43Q9NXZ2 648 aaKnown RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
RFFL-208ENST00000581039 ZFYVE26Q68DK2 2539 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 MYMKA6NI61 221 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 K7EQS6 105 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 SLC26A4O43511 780 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 HUS1O60921 280 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 TBCAO75347 108 aaKnown RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 IL18RAPO95256 599 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 NFATC1O95644 943 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 BCKDHBP21953 392 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 UBA7P41226 1012 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 PDE6CP51160 858 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 MYL7Q01449 175 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 KCNB1Q14721 858 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 CRY1Q16526 586 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 TRIM61Q5EBN2 209 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 ARL6IP4Q66PJ3 421 aaKnown RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 LRSAM1Q6UWE0 723 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 LPCAT2Q7L5N7 544 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 SPATA2LQ8IUW3 424 aaPredicted RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 PDCL2Q8N4E4 241 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 CCDC33Q8N5R6 958 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 SH3RF2Q8TEC5 729 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 LEO1Q8WVC0 666 aaPredicted RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 ZCCHC14Q8WYQ9 949 aaKnown RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 GATA6Q92908 595 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 AK8Q96MA6 479 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 NUSAP1Q9BXS6 441 aaKnown RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 EVLQ9UI08 416 aaPredicted RBP10.67□□□□□ -0.7
RFFL-208ENST00000581039 GTF3C4Q9UKN8 822 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 MMP17Q9ULZ9 603 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 STYXL1Q9Y6J8 313 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 ABCA7Q8IZY2 2146 aa10.67□□□□□ -0.7
RFFL-208ENST00000581039 C2orf78A6NCI8 922 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 TISP43B9A030 160 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 TNFRSF10BO14763 440 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 TADA3O75528 432 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 ACAT1P24752 427 aaKnown RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 RDXP35241 583 aaKnown RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 MAPK8P45983 427 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 MRPS21P82921 87 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms