RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 MAGEA9P43362 315 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 VAMP7P51809 220 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 DLG4P78352 724 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 CSTF1Q05048 431 aaKnown RBP26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 STIM1Q13586 685 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 NCOA4Q13772 614 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 TANGO2Q6ICL3 276 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 KBTBD7Q8WVZ9 684 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 CLDN23Q96B33 292 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 NELL2Q99435 816 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 DNAJC25Q9H1X3 360 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 SNX25Q9H3E2 840 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 MIA3Q5JRA6 1907 aa26.58■■□□□ 1.85
CDC42EP4-205ENST00000580315 CETN3O15182 167 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 TACC1O75410 805 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 SOAT2O75908 522 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 FGF19O95750 216 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 TARSP26639 723 aaKnown RBP26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 CDR1P51861 262 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 ENPEPQ07075 957 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 TAF12Q16514 161 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZNF699Q32M78 642 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 DGLUCYQ7Z3D6 616 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 PSMG2Q969U7 264 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 ELSPBP1Q96BH3 223 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 TCEAL4Q96EI5 215 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 XYLT2Q9H1B5 865 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 ABCB6Q9NP58 842 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 TMLHEQ9NVH6 421 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 NXF1Q9UBU9 619 aaKnown RBP26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 CDH9Q9ULB4 789 aa26.57■■□□□ 1.84
CDC42EP4-205ENST00000580315 PPP1R2P41236 205 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 CCR2P41597 374 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 PUM1Q14671 1186 aaKnown RBP eCLIP26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZACNQ401N2 412 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZNF667Q5HYK9 610 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZNF852Q6ZMS4 543 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 DNAJB7Q7Z6W7 309 aaPredicted RBP26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 SPATA2LQ8IUW3 424 aaPredicted RBP26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 SYT15Q9BQS2 421 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 PI4K2AQ9BTU6 479 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 MKNK1Q9BUB5 465 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 VRTNQ9H8Y1 702 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 HEBP1Q9NRV9 189 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 GTF3C4Q9UKN8 822 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 PCDHGA2Q9Y5H1 932 aa26.56■■□□□ 1.84
CDC42EP4-205ENST00000580315 SHISA7A6NL88 538 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 NCAM2O15394 837 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 P4HA1P13674 534 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 FCARP24071 287 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 GNL1P36915 607 aaPredicted RBP26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 RPS9P46781 194 aaKnown RBP26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 FZD5Q13467 585 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 MAPRE1Q15691 268 aaKnown RBP26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 SGSM1Q2NKQ1 1148 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 C4orf50Q6ZRC1 276 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 ATRIPQ8WXE1 791 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 GPR88Q9GZN0 384 aa26.55■■□□□ 1.84
CDC42EP4-205ENST00000580315 MED19A0JLT2 244 aaPredicted RBP26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 PSMA7O14818 248 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 EPB41P11171 864 aaKnown RBP26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 ATF6P18850 670 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 LMO2P25791 158 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 RPL10AP62906 217 aaKnown RBP26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 LRRC63Q05C16 580 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 FAM78AQ5JUQ0 283 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 SV2AQ7L0J3 742 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 TMC8Q8IU68 726 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZBTB44Q8NCP5 570 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 OR6B3Q8NGW1 331 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 TAF4BQ92750 862 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 FUBP3Q96I24 572 aaKnown RBP eCLIP26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 PKMYT1Q99640 499 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 LPIN3Q9BQK8 851 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 MRPL45Q9BRJ2 306 aaKnown RBP26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 LRRC3Q9BY71 257 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 MAN1B1Q9UKM7 699 aa26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 MRPS17Q9Y2R5 130 aaKnown RBP26.54■■□□□ 1.84
CDC42EP4-205ENST00000580315 MYBPHLA2RUH7 354 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 HCRTO43612 131 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 VNN1O95497 513 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 PDGFRBP09619 1106 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 PIK3CAP42336 1068 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 PSMC1P62191 440 aaKnown RBP26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 FKBP3Q00688 224 aaKnown RBP26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 CFAP221Q4G0U5 840 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 ISM2Q6H9L7 571 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 FAM171BQ6P995 826 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 GIPC2Q8TF65 315 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 NELL1Q92832 810 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 DNASE1L2Q92874 299 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 IMPG2Q9BZV3 1241 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 SLITRK6Q9H5Y7 841 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZFP14Q9HCL3 533 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 ZSCAN32Q9NX65 697 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 DLL3Q9NYJ7 618 aa26.53■■□□□ 1.84
CDC42EP4-205ENST00000580315 A0A1W2PRU2 124 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 TRIM49P0CI25 452 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 TRIM49CP0CI26 452 aa26.52■■□□□ 1.84
CDC42EP4-205ENST00000580315 GRM2Q14416 872 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms