RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 MEI4A8MW99 385 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 XPOTO43592 962 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 UPP2O95045 317 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 AP3M2P53677 418 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 NLRP11P59045 1033 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 PTK6Q13882 451 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 SPDYCQ5MJ68 293 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 ARMCX2Q7L311 632 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 ART4Q93070 314 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 NMD3Q96D46 503 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 CNBD2Q96M20 576 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 C20orf96Q9NUD7 363 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 PIK3C2AO00443 1686 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 EEF1DP29692 281 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 PHKA2P46019 1235 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 VCPP55072 806 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 PRAMEF18Q5VWM3 479 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 KCNV1Q6PIU1 500 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 CRELD2Q6UXH1 353 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 LRRC57Q8N9N7 239 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 FAM167AQ96KS9 214 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 RHBDL2Q9NX52 303 aa14.18□□□□□ -0.14
TRAPPC8-207ENST00000580104 PDGFRBP09619 1106 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 C16orf87Q6PH81 154 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 SIK2Q9H0K1 926 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 FRMPD4Q14CM0 1322 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 SPAG6O75602 509 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 IL1R1P14778 569 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 CREB1P16220 341 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 EFNA5P52803 228 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 DRG2P55039 364 aaKnown RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 FOXD4Q12950 439 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 LAYNQ6UX15 382 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 C4orf50Q6ZRC1 276 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 ABRAQ8N0Z2 381 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 TTC8Q8TAM2 541 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 ETNPPLQ8TBG4 499 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 SNRNP27Q8WVK2 155 aaKnown RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 DNAJC16Q9Y2G8 782 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 F8VP50 259 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 VCAM1P19320 739 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 PTDSS1P48651 473 aaKnown RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 NUDT2P50583 147 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 ARL13BQ3SXY8 428 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 WASHC2DQ5SRD0 308 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 ZCCHC23Q6ZST2 131 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 FSD1LQ9BXM9 530 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 TASP1Q9H6P5 420 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 CYP39A1Q9NYL5 469 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 NCANO14594 1321 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 DDX3YO15523 660 aaKnown RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 RPL10AP62906 217 aaKnown RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 SLC34A1Q06495 639 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 DPP9Q86TI2 863 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 PIH1D1Q9NWS0 290 aaKnown RBP14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 COG5Q9UP83 839 aa14.17□□□□□ -0.14
TRAPPC8-207ENST00000580104 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 PPP1R11O60927 126 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 TAC1P20366 129 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SERPINB5P36952 375 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 RAP1GAPP47736 663 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SERPINB9P50453 376 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 MYL6P60660 151 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 YWHAHQ04917 246 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 THEMIS2Q5TEJ8 643 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 LRRC74BQ6ZQY2 392 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 RASGEF1CQ8N431 466 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 ZNF606Q8WXB4 792 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SPATA33Q96N06 139 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 C2orf40Q9H1Z8 148 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 BAG5Q9UL15 447 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 XRN1Q8IZH2 1706 aaKnown RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 HACE1Q8IYU2 909 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 ING2Q9H160 280 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 KCNQ5Q9NR82 932 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 LRCH1Q9Y2L9 728 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 GPD1P21695 349 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 PMLP29590 882 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 STIP1P31948 543 aaKnown RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 IYDQ6PHW0 289 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 TMC2Q8TDI7 906 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SGF29Q96ES7 293 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 KRT82Q9NSB4 513 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 ADRB2P07550 413 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 FMO1Q01740 532 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 FAAP100Q0VG06 881 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 GRAMD4Q6IC98 578 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 USP33Q8TEY7 942 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 HAUS8Q9BT25 410 aa14.16□□□□□ -0.14
TRAPPC8-207ENST00000580104 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
TRAPPC8-207ENST00000580104 SNUPNO95149 360 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms