RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PRPF40AO75400 957 aaKnown RBP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 RPP40O75818 363 aaKnown RBP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 GARTP22102 1010 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 CMA1P23946 247 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 PCSK1P29120 753 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TNK2Q07912 1038 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TMEM196Q5HYL7 178 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 PPM1JQ5JR12 505 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 L1TD1Q5T7N2 865 aaKnown RBP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 WSCD1Q658N2 575 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 STXBP4Q6ZWJ1 553 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 ZNF720Q7Z2F6 126 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 BRSK2Q8IWQ3 736 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 SYCP3Q8IZU3 236 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TMEM130Q8N3G9 435 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 CAMKK1Q8N5S9 505 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 MAB21L3Q8N8X9 362 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TTC8Q8TAM2 541 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 GIPC2Q8TF65 315 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 ATP2A3Q93084 1043 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TRMT2BQ96GJ1 504 aaKnown RBP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 FUBP3Q96I24 572 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAF4-214ENST00000580073 ACBD6Q9BR61 282 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 EHD2Q9NZN4 543 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 PCDHB13Q9Y5F0 798 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 PCDHGA5Q9Y5G8 931 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 MYH10P35580 1976 aa14.36□□□□□ -0.11
TRAF4-214ENST00000580073 TRAV19A0A0A6YYK7 116 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 TRDMT1O14717 391 aaKnown RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 POLR2DO15514 142 aaKnown RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 EPN2O95208 641 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 TMEM191BP0C7N4 346 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 PFKFB1P16118 471 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 LHX1P48742 406 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 NDUFA8P51970 172 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 FAM160A1Q05DH4 1040 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 MYO1EQ12965 1108 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 NR1H3Q13133 447 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 ZC2HC1CQ53FD0 456 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 INTS6LQ5JSJ4 861 aaKnown RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 SV2BQ7L1I2 683 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 C11orf74Q86VG3 221 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 MON1AQ86VX9 555 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 DHX58Q96C10 678 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 DNAJC19Q96DA6 116 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 CEP295NLQ96MC4 621 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 CNTNAP3BQ96NU0 1288 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 FAM83CQ9BQN1 747 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 SLC46A2Q9BY10 475 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 CNTNAP3Q9BZ76 1288 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 OLFML3Q9NRN5 406 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 GKN1Q9NS71 199 aa14.35□□□□□ -0.11
TRAF4-214ENST00000580073 DDX43Q9NXZ2 648 aaKnown RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 RBAKQ9NYW8 714 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 MAGED2Q9UNF1 606 aaPredicted RBP14.35□□□□□ -0.11
TRAF4-214ENST00000580073 THADAQ6YHU6 1953 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 A0A1W2PQ27 194 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 A0A1W2PQ64 194 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 A0A1W2PQD8 194 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 ACTN4O43707 911 aaKnown RBP14.34□□□□□ -0.11
TRAF4-214ENST00000580073 PPP1R37O75864 691 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 GCNT3O95395 438 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 F11P03951 625 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 ITGB3P05106 788 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 CKMP06732 381 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 USP17L7P0C7H9 530 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 PFKLP17858 780 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 CASP1P29466 404 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 POLR2BP30876 1174 aaKnown RBP14.34□□□□□ -0.11
TRAF4-214ENST00000580073 STAT6P42226 847 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 IFNAR2P48551 515 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 DMWDQ09019 674 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 KCNB1Q14721 858 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 MTF1Q14872 753 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 MAPRE1Q15691 268 aaKnown RBP14.34□□□□□ -0.11
TRAF4-214ENST00000580073 ELF2Q15723 593 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 CFAP221Q4G0U5 840 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 C4orf50Q6ZRC1 276 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 SPATA2LQ8IUW3 424 aaPredicted RBP14.34□□□□□ -0.11
TRAF4-214ENST00000580073 GRAMD1CQ8IYS0 662 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 PDCL2Q8N4E4 241 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 ANKRD36BP1Q96IX9 119 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 LRRC3BQ96PB8 259 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 PI4K2AQ9BTU6 479 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 EBF3Q9H4W6 596 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 SERTAD1Q9UHV2 236 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
TRAF4-214ENST00000580073 TULP1O00294 542 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-214ENST00000580073 NOL4O94818 638 aa14.33□□□□□ -0.12
TRAF4-214ENST00000580073 KRT19P08727 400 aa14.33□□□□□ -0.12
TRAF4-214ENST00000580073 HMGA1P17096 107 aaKnown RBP14.33□□□□□ -0.12
TRAF4-214ENST00000580073 RBP5P82980 135 aa14.33□□□□□ -0.12
TRAF4-214ENST00000580073 USP4Q13107 963 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms