RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CCDC196A0A1B0GTZ2 297 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 FSD2A1L4K1 749 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SYNDIG1LA6NDD5 238 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ACOT7O00154 380 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 CLASP2O75122 1294 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SOAT2O75908 522 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 FTLP02792 175 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 CLEC2LP0C7M8 214 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 HARSP12081 509 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 VEGFAP15692 232 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SERPINF1P36955 418 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 WASP42768 502 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 MAP2K6P52564 334 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 RAB1AP62820 205 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 IL13RA1P78552 427 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TLE2Q04725 743 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 PMS2P11Q13670 270 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TMEM132BQ14DG7 1078 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SEPT2Q15019 361 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 PLCB4Q15147 1175 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 CNGA2Q16280 664 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 FIGNQ5HY92 759 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TIGD7Q6NT04 549 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ESRP1Q6NXG1 681 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 KLHDC10Q6PID8 442 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 FAM111BQ6SJ93 734 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 BEND5Q7L4P6 421 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TTC7BQ86TV6 843 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 LRRTM4Q86VH4 590 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 PHYKPLQ8IUZ5 450 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 NOSTRINQ8IVI9 506 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TXLNBQ8N3L3 684 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ATP11CQ8NB49 1132 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 AFAP1L1Q8TED9 768 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ATRIPQ8WXE1 791 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 RIN2Q8WYP3 895 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 CAVIN3Q969G5 261 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 MUL1Q969V5 352 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 RGMAQ96B86 450 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 VMP1Q96GC9 406 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SUCLG2Q96I99 432 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 MAELQ96JY0 434 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 COQ10AQ96MF6 247 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ZMAT2Q96NC0 199 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SDF4Q9BRK5 362 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 PYM1Q9BRP8 204 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 EIF2AQ9BY44 585 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ACE2Q9BYF1 805 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SENP6Q9GZR1 1112 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 ZCCHC17Q9NP64 241 aaKnown RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 OBP2BQ9NPH6 170 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SERHLQ9NQF3 203 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 VPS45Q9NRW7 570 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 KCNH7Q9NS40 1196 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SYBUQ9NX95 663 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 GGA3Q9NZ52 723 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 AASSQ9UDR5 926 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SLC39A10Q9ULF5 831 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 GPR34Q9UPC5 381 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 SRPK3Q9UPE1 567 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 LIMCH1Q9UPQ0 1083 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TELO2Q9Y4R8 837 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 EPN1Q9Y6I3 576 aaPredicted RBP3.54□□□□□ -1.84
KPNB1-208ENST00000580019 NUMBLQ9Y6R0 609 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 GRIN2AQ12879 1464 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 TEX14Q8IWB6 1497 aa3.54□□□□□ -1.84
KPNB1-208ENST00000580019 NUP160Q12769 1436 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 ADAMTSL3P82987 1691 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 ST20-MTHFSA0A0A6YYL1 179 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 A0A0G2JNJ9 132 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 B4DLN1 442 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 SYT5O00445 386 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 KCNK3O14649 394 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 NPC1O15118 1278 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 MTA2O94776 668 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 IGLV2-14P01704 120 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 CKMT1AP12532 417 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 ALOX15P16050 662 aaPredicted RBP3.53□□□□□ -1.84
KPNB1-208ENST00000580019 XPAP23025 273 aaPredicted RBP3.53□□□□□ -1.84
KPNB1-208ENST00000580019 EDNRBP24530 442 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 SLC7A1P30825 629 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 GALNSP34059 522 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 CTNNA1P35221 906 aaKnown RBP3.53□□□□□ -1.84
KPNB1-208ENST00000580019 UBA7P41226 1012 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 STAT1P42224 750 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 NPTX2P47972 431 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 EPHA5P54756 1037 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 LGALS4P56470 323 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 DCAF7P61962 342 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 VAMP2P63027 116 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 KRT83P78385 493 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 FMO1Q01740 532 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 GALNT1Q10472 559 aaPredicted RBP3.53□□□□□ -1.84
KPNB1-208ENST00000580019 TRPC3Q13507 836 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 EFR3AQ14156 821 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 SPIDRQ14159 915 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 PTK2BQ14289 1009 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 SPARCL1Q14515 664 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 FAM110CQ1W6H9 321 aa3.53□□□□□ -1.84
KPNB1-208ENST00000580019 SLC35G1Q2M3R5 365 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms